Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN17P56750 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN17P56750 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN17P56750 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.15■□□□□ 0.02
CLDN17P56750 PAWRP1-201ENST00000451083 565 ntBASIC15.15■□□□□ 0.02
CLDN17P56750 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.15■□□□□ 0.02
CLDN17P56750 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.15■□□□□ 0.02
CLDN17P56750 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.15■□□□□ 0.02
CLDN17P56750 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.15■□□□□ 0.02
CLDN17P56750 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN17P56750 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.15■□□□□ 0.02
CLDN17P56750 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CLDN17P56750 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN17P56750 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN17P56750 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN17P56750 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN17P56750 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN17P56750 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN17P56750 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN17P56750 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN17P56750 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
CLDN17P56750 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN17P56750 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN17P56750 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN17P56750 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN17P56750 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN17P56750 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN17P56750 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN17P56750 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN17P56750 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN17P56750 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN17P56750 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN17P56750 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CLDN17P56750 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN17P56750 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN17P56750 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CLDN17P56750 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CLDN17P56750 AC087163.2-201ENST00000457299 853 ntBASIC15.14■□□□□ 0.01
CLDN17P56750 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN17P56750 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN17P56750 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN17P56750 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN17P56750 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN17P56750 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN17P56750 GGTLC5P-201ENST00000617623 998 ntBASIC15.14■□□□□ 0.01
CLDN17P56750 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN17P56750 AC117500.6-201ENST00000624871 588 ntBASIC15.14■□□□□ 0.01
CLDN17P56750 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.14■□□□□ 0.01
CLDN17P56750 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN17P56750 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
CLDN17P56750 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN17P56750 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN17P56750 AC106886.4-201ENST00000623557 2502 ntBASIC15.14■□□□□ 0.01
CLDN17P56750 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN17P56750 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CLDN17P56750 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN17P56750 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CLDN17P56750 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN17P56750 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN17P56750 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN17P56750 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN17P56750 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN17P56750 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
CLDN17P56750 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CLDN17P56750 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN17P56750 AC099398.1-201ENST00000567919 2776 ntBASIC15.13■□□□□ 0.01
CLDN17P56750 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN17P56750 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN17P56750 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN17P56750 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN17P56750 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN17P56750 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN17P56750 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN17P56750 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
CLDN17P56750 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN17P56750 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN17P56750 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CLDN17P56750 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN17P56750 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN17P56750 AC079776.4-201ENST00000511039 504 ntBASIC15.13■□□□□ 0.01
CLDN17P56750 DUX4L17-201ENST00000557360 1267 ntBASIC15.13■□□□□ 0.01
CLDN17P56750 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN17P56750 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.13■□□□□ 0.01
CLDN17P56750 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN17P56750 AC008667.4-201ENST00000607370 168 ntBASIC15.13■□□□□ 0.01
CLDN17P56750 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.13■□□□□ 0.01
CLDN17P56750 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.13■□□□□ 0.01
CLDN17P56750 AC116407.3-201ENST00000623905 1129 ntBASIC15.13■□□□□ 0.01
CLDN17P56750 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN17P56750 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN17P56750 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN17P56750 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN17P56750 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN17P56750 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN17P56750 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN17P56750 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CLDN17P56750 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN17P56750 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN17P56750 HLA-A-201ENST00000376802 1334 ntBASIC15.13■□□□□ 0.01
CLDN17P56750 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms