Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN6P56747 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN6P56747 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN6P56747 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN6P56747 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CLDN6P56747 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN6P56747 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN6P56747 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN6P56747 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN6P56747 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CLDN6P56747 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.22■□□□□ 0.19
CLDN6P56747 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN6P56747 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN6P56747 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CLDN6P56747 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN6P56747 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.22■□□□□ 0.19
CLDN6P56747 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.22■□□□□ 0.19
CLDN6P56747 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.22■□□□□ 0.19
CLDN6P56747 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN6P56747 AC004890.2-204ENST00000481968 304 ntBASIC16.22■□□□□ 0.19
CLDN6P56747 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.22■□□□□ 0.19
CLDN6P56747 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.22■□□□□ 0.19
CLDN6P56747 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN6P56747 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CLDN6P56747 AC025048.6-201ENST00000634326 1161 ntBASIC16.22■□□□□ 0.19
CLDN6P56747 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CLDN6P56747 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN6P56747 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CLDN6P56747 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN6P56747 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
CLDN6P56747 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.22■□□□□ 0.19
CLDN6P56747 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN6P56747 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN6P56747 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CLDN6P56747 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN6P56747 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CLDN6P56747 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN6P56747 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
CLDN6P56747 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN6P56747 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN6P56747 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN6P56747 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CLDN6P56747 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN6P56747 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN6P56747 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.21■□□□□ 0.19
CLDN6P56747 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN6P56747 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN6P56747 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN6P56747 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN6P56747 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN6P56747 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN6P56747 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN6P56747 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN6P56747 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CLDN6P56747 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN6P56747 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN6P56747 OR8S1-201ENST00000310194 1080 ntBASIC16.21■□□□□ 0.19
CLDN6P56747 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN6P56747 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CLDN6P56747 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN6P56747 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.21■□□□□ 0.19
CLDN6P56747 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN6P56747 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.21■□□□□ 0.19
CLDN6P56747 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.21■□□□□ 0.19
CLDN6P56747 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CLDN6P56747 KRT8P23-201ENST00000560090 1207 ntBASIC16.21■□□□□ 0.19
CLDN6P56747 AL138918.1-201ENST00000568306 659 ntBASIC16.21■□□□□ 0.19
CLDN6P56747 AP000842.3-202ENST00000569238 1080 ntBASIC16.21■□□□□ 0.19
CLDN6P56747 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN6P56747 AC027307.2-201ENST00000591252 911 ntBASIC16.21■□□□□ 0.19
CLDN6P56747 AL662799.1-202ENST00000614205 422 ntBASIC16.21■□□□□ 0.19
CLDN6P56747 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN6P56747 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN6P56747 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN6P56747 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN6P56747 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN6P56747 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLDN6P56747 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CLDN6P56747 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.21■□□□□ 0.18
CLDN6P56747 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLDN6P56747 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
CLDN6P56747 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CLDN6P56747 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN6P56747 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
CLDN6P56747 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.2■□□□□ 0.18
CLDN6P56747 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN6P56747 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.2■□□□□ 0.18
CLDN6P56747 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.2■□□□□ 0.18
CLDN6P56747 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN6P56747 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN6P56747 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CLDN6P56747 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN6P56747 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN6P56747 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN6P56747 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
CLDN6P56747 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CLDN6P56747 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN6P56747 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN6P56747 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CLDN6P56747 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms