Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.48■□□□□ 0.07
HMGA2P52926 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGA2P52926 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
HMGA2P52926 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGA2P52926 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGA2P52926 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGA2P52926 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.48■□□□□ 0.07
HMGA2P52926 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.48■□□□□ 0.07
HMGA2P52926 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.48■□□□□ 0.07
HMGA2P52926 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGA2P52926 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
HMGA2P52926 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
HMGA2P52926 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGA2P52926 AL603832.2-201ENST00000566195 2125 ntBASIC15.47■□□□□ 0.07
HMGA2P52926 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGA2P52926 AL590787.1-201ENST00000568856 1315 ntBASIC15.47■□□□□ 0.07
HMGA2P52926 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.47■□□□□ 0.07
HMGA2P52926 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGA2P52926 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGA2P52926 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGA2P52926 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HMGA2P52926 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGA2P52926 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HMGA2P52926 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGA2P52926 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGA2P52926 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGA2P52926 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
HMGA2P52926 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGA2P52926 DRAXINP1-201ENST00000437611 948 ntBASIC15.47■□□□□ 0.07
HMGA2P52926 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.47■□□□□ 0.07
HMGA2P52926 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HMGA2P52926 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.47■□□□□ 0.07
HMGA2P52926 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.47■□□□□ 0.07
HMGA2P52926 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
HMGA2P52926 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HMGA2P52926 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
HMGA2P52926 AC132872.4-202ENST00000622924 2756 ntBASIC15.47■□□□□ 0.07
HMGA2P52926 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HMGA2P52926 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGA2P52926 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HMGA2P52926 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGA2P52926 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGA2P52926 AC243591.1-201ENST00000452967 1364 ntBASIC15.47■□□□□ 0.07
HMGA2P52926 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HMGA2P52926 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGA2P52926 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.47■□□□□ 0.07
HMGA2P52926 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
HMGA2P52926 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.46■□□□□ 0.07
HMGA2P52926 OR6D1P-203ENST00000641209 4860 ntBASIC15.46■□□□□ 0.07
HMGA2P52926 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGA2P52926 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HMGA2P52926 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGA2P52926 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGA2P52926 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGA2P52926 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.46■□□□□ 0.07
HMGA2P52926 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HMGA2P52926 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGA2P52926 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGA2P52926 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGA2P52926 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
HMGA2P52926 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGA2P52926 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.46■□□□□ 0.07
HMGA2P52926 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
HMGA2P52926 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HMGA2P52926 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.46■□□□□ 0.07
HMGA2P52926 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.46■□□□□ 0.07
HMGA2P52926 DUX4L26-201ENST00000489078 1255 ntBASIC15.46■□□□□ 0.07
HMGA2P52926 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
HMGA2P52926 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
HMGA2P52926 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.46■□□□□ 0.07
HMGA2P52926 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
HMGA2P52926 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.46■□□□□ 0.07
HMGA2P52926 Z69720.1-201ENST00000601483 472 ntBASIC15.46■□□□□ 0.07
HMGA2P52926 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGA2P52926 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGA2P52926 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGA2P52926 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGA2P52926 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.46■□□□□ 0.07
HMGA2P52926 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGA2P52926 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGA2P52926 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGA2P52926 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
HMGA2P52926 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
HMGA2P52926 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HMGA2P52926 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HMGA2P52926 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
HMGA2P52926 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
HMGA2P52926 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HMGA2P52926 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
HMGA2P52926 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.45■□□□□ 0.06
HMGA2P52926 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGA2P52926 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
HMGA2P52926 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGA2P52926 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGA2P52926 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGA2P52926 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HMGA2P52926 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGA2P52926 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGA2P52926 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGA2P52926 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms