Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.67■□□□□ 0.42
MMP13P45452 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MMP13P45452 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP13P45452 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.67■□□□□ 0.42
MMP13P45452 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
MMP13P45452 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP13P45452 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP13P45452 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.66■□□□□ 0.42
MMP13P45452 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP13P45452 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP13P45452 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP13P45452 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MMP13P45452 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP13P45452 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MMP13P45452 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
MMP13P45452 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP13P45452 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP13P45452 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.66■□□□□ 0.42
MMP13P45452 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
MMP13P45452 SART3-203ENST00000546611 1184 ntBASIC17.66■□□□□ 0.42
MMP13P45452 AL022326.1-202ENST00000641533 845 ntBASIC17.66■□□□□ 0.42
MMP13P45452 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MMP13P45452 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
MMP13P45452 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MMP13P45452 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MMP13P45452 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP13P45452 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
MMP13P45452 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP13P45452 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.66■□□□□ 0.42
MMP13P45452 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP13P45452 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP13P45452 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP13P45452 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP13P45452 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP13P45452 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP13P45452 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.65■□□□□ 0.42
MMP13P45452 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MMP13P45452 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP13P45452 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.65■□□□□ 0.42
MMP13P45452 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP13P45452 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.65■□□□□ 0.42
MMP13P45452 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MMP13P45452 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.65■□□□□ 0.42
MMP13P45452 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.65■□□□□ 0.42
MMP13P45452 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.65■□□□□ 0.42
MMP13P45452 AC004870.1-201ENST00000315132 882 ntBASIC17.65■□□□□ 0.42
MMP13P45452 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MMP13P45452 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP13P45452 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MMP13P45452 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP13P45452 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.65■□□□□ 0.42
MMP13P45452 PRYP5-201ENST00000451909 266 ntBASIC17.65■□□□□ 0.42
MMP13P45452 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MMP13P45452 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.65■□□□□ 0.42
MMP13P45452 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.65■□□□□ 0.42
MMP13P45452 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.65■□□□□ 0.42
MMP13P45452 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.65■□□□□ 0.42
MMP13P45452 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.65■□□□□ 0.42
MMP13P45452 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.65■□□□□ 0.42
MMP13P45452 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.65■□□□□ 0.42
MMP13P45452 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MMP13P45452 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.65■□□□□ 0.42
MMP13P45452 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MMP13P45452 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
MMP13P45452 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.65■□□□□ 0.42
MMP13P45452 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.65■□□□□ 0.42
MMP13P45452 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MMP13P45452 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP13P45452 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP13P45452 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MMP13P45452 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
MMP13P45452 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.65■□□□□ 0.42
MMP13P45452 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MMP13P45452 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.65■□□□□ 0.42
MMP13P45452 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.64■□□□□ 0.42
MMP13P45452 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
MMP13P45452 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
MMP13P45452 LINC00554-201ENST00000564841 3011 ntBASIC17.64■□□□□ 0.41
MMP13P45452 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP13P45452 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP13P45452 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP13P45452 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
MMP13P45452 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP13P45452 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP13P45452 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP13P45452 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.64■□□□□ 0.41
MMP13P45452 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP13P45452 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.64■□□□□ 0.41
MMP13P45452 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.64■□□□□ 0.41
MMP13P45452 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
MMP13P45452 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.64■□□□□ 0.41
MMP13P45452 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.64■□□□□ 0.41
MMP13P45452 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP13P45452 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.64■□□□□ 0.41
MMP13P45452 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.64■□□□□ 0.41
MMP13P45452 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP13P45452 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP13P45452 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
MMP13P45452 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP13P45452 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms