Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
KRT20P35900 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.18■□□□□ 0.18
KRT20P35900 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT20P35900 KRT8P10-201ENST00000450021 1447 ntBASIC16.18■□□□□ 0.18
KRT20P35900 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT20P35900 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT20P35900 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT20P35900 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
KRT20P35900 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT20P35900 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT20P35900 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT20P35900 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT20P35900 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT20P35900 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.18■□□□□ 0.18
KRT20P35900 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
KRT20P35900 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT20P35900 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
KRT20P35900 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT20P35900 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT20P35900 AL049757.1-201ENST00000616842 1596 ntBASIC16.17■□□□□ 0.18
KRT20P35900 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT20P35900 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT20P35900 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT20P35900 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
KRT20P35900 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT20P35900 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT20P35900 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT20P35900 AC068418.2-201ENST00000577309 3703 ntBASIC16.17■□□□□ 0.18
KRT20P35900 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
KRT20P35900 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT20P35900 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
KRT20P35900 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT20P35900 AC063926.3-201ENST00000624734 5658 ntBASIC16.17■□□□□ 0.18
KRT20P35900 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT20P35900 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT20P35900 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT20P35900 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT20P35900 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
KRT20P35900 LINC02199-201ENST00000506655 2702 ntBASIC16.17■□□□□ 0.18
KRT20P35900 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT20P35900 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT20P35900 ABCD1P5-201ENST00000445663 754 ntBASIC16.17■□□□□ 0.18
KRT20P35900 AC132008.2-207ENST00000454517 770 ntBASIC16.17■□□□□ 0.18
KRT20P35900 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.17■□□□□ 0.18
KRT20P35900 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT20P35900 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT20P35900 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.17■□□□□ 0.18
KRT20P35900 AL732292.2-201ENST00000609649 430 ntBASIC16.17■□□□□ 0.18
KRT20P35900 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT20P35900 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
KRT20P35900 AC073592.5-201ENST00000624854 528 ntBASIC16.17■□□□□ 0.18
KRT20P35900 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
KRT20P35900 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT20P35900 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
KRT20P35900 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT20P35900 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT20P35900 AL603756.1-201ENST00000606511 2163 ntBASIC16.17■□□□□ 0.18
KRT20P35900 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT20P35900 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT20P35900 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT20P35900 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT20P35900 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT20P35900 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT20P35900 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT20P35900 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT20P35900 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
KRT20P35900 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT20P35900 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT20P35900 AL353593.2-201ENST00000602529 1483 ntBASIC16.16■□□□□ 0.18
KRT20P35900 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
KRT20P35900 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT20P35900 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT20P35900 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT20P35900 AC005915.1-201ENST00000624912 2018 ntBASIC16.16■□□□□ 0.18
KRT20P35900 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT20P35900 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
KRT20P35900 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT20P35900 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT20P35900 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT20P35900 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT20P35900 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.16■□□□□ 0.18
KRT20P35900 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT20P35900 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
KRT20P35900 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.16■□□□□ 0.18
KRT20P35900 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT20P35900 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT20P35900 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT20P35900 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
KRT20P35900 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
KRT20P35900 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT20P35900 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT20P35900 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KRT20P35900 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
KRT20P35900 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT20P35900 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.16■□□□□ 0.18
KRT20P35900 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT20P35900 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT20P35900 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.16■□□□□ 0.18
KRT20P35900 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KRT20P35900 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms