Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.35■□□□□ 0.05
GDF1P27539 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDF1P27539 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GDF1P27539 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.35■□□□□ 0.05
GDF1P27539 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
GDF1P27539 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
GDF1P27539 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.34■□□□□ 0.05
GDF1P27539 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDF1P27539 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.34■□□□□ 0.05
GDF1P27539 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.34■□□□□ 0.05
GDF1P27539 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDF1P27539 NFIC-211ENST00000641145 8399 ntBASIC15.34■□□□□ 0.05
GDF1P27539 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDF1P27539 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
GDF1P27539 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDF1P27539 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDF1P27539 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.34■□□□□ 0.05
GDF1P27539 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDF1P27539 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GDF1P27539 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.34■□□□□ 0.05
GDF1P27539 AC012569.1-201ENST00000591191 1524 ntBASIC15.34■□□□□ 0.05
GDF1P27539 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
GDF1P27539 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDF1P27539 LETM1P2-201ENST00000597330 2178 ntBASIC15.34■□□□□ 0.05
GDF1P27539 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDF1P27539 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDF1P27539 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.34■□□□□ 0.05
GDF1P27539 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.34■□□□□ 0.05
GDF1P27539 AC112191.1-201ENST00000523689 701 ntBASIC15.34■□□□□ 0.05
GDF1P27539 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
GDF1P27539 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.34■□□□□ 0.05
GDF1P27539 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GDF1P27539 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.34■□□□□ 0.05
GDF1P27539 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
GDF1P27539 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.34■□□□□ 0.05
GDF1P27539 MIR4515-201ENST00000584082 81 ntBASIC15.34■□□□□ 0.05
GDF1P27539 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.34■□□□□ 0.05
GDF1P27539 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GDF1P27539 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.34■□□□□ 0.05
GDF1P27539 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDF1P27539 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDF1P27539 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
GDF1P27539 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.34■□□□□ 0.05
GDF1P27539 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GDF1P27539 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
GDF1P27539 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GDF1P27539 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDF1P27539 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDF1P27539 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDF1P27539 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.34■□□□□ 0.05
GDF1P27539 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.34■□□□□ 0.05
GDF1P27539 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
GDF1P27539 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDF1P27539 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GDF1P27539 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDF1P27539 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GDF1P27539 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDF1P27539 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
GDF1P27539 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
GDF1P27539 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
GDF1P27539 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
GDF1P27539 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
GDF1P27539 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
GDF1P27539 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
GDF1P27539 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
GDF1P27539 ELL2P1-201ENST00000413990 1906 ntBASIC15.33■□□□□ 0.05
GDF1P27539 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.33■□□□□ 0.05
GDF1P27539 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.33■□□□□ 0.05
GDF1P27539 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.33■□□□□ 0.04
GDF1P27539 AC092919.2-201ENST00000623631 1645 ntBASIC15.33■□□□□ 0.04
GDF1P27539 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GDF1P27539 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.33■□□□□ 0.04
GDF1P27539 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
GDF1P27539 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GDF1P27539 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
GDF1P27539 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.33■□□□□ 0.04
GDF1P27539 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.33■□□□□ 0.04
GDF1P27539 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.33■□□□□ 0.04
GDF1P27539 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.33■□□□□ 0.04
GDF1P27539 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.33■□□□□ 0.04
GDF1P27539 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.33■□□□□ 0.04
GDF1P27539 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.33■□□□□ 0.04
GDF1P27539 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.33■□□□□ 0.04
GDF1P27539 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.33■□□□□ 0.04
GDF1P27539 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.33■□□□□ 0.04
GDF1P27539 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.33■□□□□ 0.04
GDF1P27539 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.33■□□□□ 0.04
GDF1P27539 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GDF1P27539 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GDF1P27539 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GDF1P27539 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GDF1P27539 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
GDF1P27539 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GDF1P27539 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
GDF1P27539 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.33■□□□□ 0.04
GDF1P27539 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GDF1P27539 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
GDF1P27539 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
GDF1P27539 PCDHB18P-201ENST00000524813 2368 ntBASIC15.33■□□□□ 0.04
GDF1P27539 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms