Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.74■□□□□ 0.27
VARSP26640 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VARSP26640 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARSP26640 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARSP26640 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARSP26640 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.73■□□□□ 0.27
VARSP26640 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.73■□□□□ 0.27
VARSP26640 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.73■□□□□ 0.27
VARSP26640 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.73■□□□□ 0.27
VARSP26640 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.73■□□□□ 0.27
VARSP26640 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.73■□□□□ 0.27
VARSP26640 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
VARSP26640 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
VARSP26640 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.73■□□□□ 0.27
VARSP26640 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.73■□□□□ 0.27
VARSP26640 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
VARSP26640 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.73■□□□□ 0.27
VARSP26640 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.73■□□□□ 0.27
VARSP26640 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
VARSP26640 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.73■□□□□ 0.27
VARSP26640 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.73■□□□□ 0.27
VARSP26640 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
VARSP26640 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.73■□□□□ 0.27
VARSP26640 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.73■□□□□ 0.27
VARSP26640 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
VARSP26640 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.73■□□□□ 0.27
VARSP26640 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.73■□□□□ 0.27
VARSP26640 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARSP26640 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
VARSP26640 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.73■□□□□ 0.27
VARSP26640 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VARSP26640 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.72■□□□□ 0.27
VARSP26640 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.72■□□□□ 0.27
VARSP26640 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
VARSP26640 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
VARSP26640 AP005117.1-201ENST00000584346 1413 ntBASIC16.72■□□□□ 0.27
VARSP26640 AC004817.3-201ENST00000602957 2129 ntBASIC16.72■□□□□ 0.27
VARSP26640 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
VARSP26640 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.72■□□□□ 0.27
VARSP26640 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.72■□□□□ 0.27
VARSP26640 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VARSP26640 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
VARSP26640 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
VARSP26640 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.72■□□□□ 0.27
VARSP26640 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VARSP26640 SPDYE21P-201ENST00000413323 827 ntBASIC16.72■□□□□ 0.27
VARSP26640 AL020989.1-201ENST00000422979 469 ntBASIC16.72■□□□□ 0.27
VARSP26640 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.72■□□□□ 0.27
VARSP26640 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.72■□□□□ 0.27
VARSP26640 RNPS1P1-201ENST00000507437 918 ntBASIC16.72■□□□□ 0.27
VARSP26640 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VARSP26640 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VARSP26640 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.72■□□□□ 0.27
VARSP26640 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VARSP26640 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
VARSP26640 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
VARSP26640 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.72■□□□□ 0.27
VARSP26640 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VARSP26640 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
VARSP26640 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
VARSP26640 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VARSP26640 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VARSP26640 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.71■□□□□ 0.27
VARSP26640 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VARSP26640 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
VARSP26640 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.71■□□□□ 0.27
VARSP26640 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
VARSP26640 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VARSP26640 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
VARSP26640 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
VARSP26640 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
VARSP26640 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
VARSP26640 PCDHA14-201ENST00000506751 2298 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms