Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.57■□□□□ 0.72
ATP2B1P20020 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B1P20020 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.57■□□□□ 0.72
ATP2B1P20020 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B1P20020 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B1P20020 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B1P20020 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B1P20020 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ATP2B1P20020 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.56■□□□□ 0.72
ATP2B1P20020 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.56■□□□□ 0.72
ATP2B1P20020 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
ATP2B1P20020 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ATP2B1P20020 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
ATP2B1P20020 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ATP2B1P20020 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.56■□□□□ 0.72
ATP2B1P20020 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ATP2B1P20020 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ATP2B1P20020 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
ATP2B1P20020 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
ATP2B1P20020 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.56■□□□□ 0.72
ATP2B1P20020 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 RNPS1P1-201ENST00000507437 918 ntBASIC19.56■□□□□ 0.72
ATP2B1P20020 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.56■□□□□ 0.72
ATP2B1P20020 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.56■□□□□ 0.72
ATP2B1P20020 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.56■□□□□ 0.72
ATP2B1P20020 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.56■□□□□ 0.72
ATP2B1P20020 AL121912.1-201ENST00000603683 238 ntBASIC19.56■□□□□ 0.72
ATP2B1P20020 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
ATP2B1P20020 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.56■□□□□ 0.72
ATP2B1P20020 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
ATP2B1P20020 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 FLJ38576-201ENST00000623820 2459 ntBASIC19.56■□□□□ 0.72
ATP2B1P20020 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP2B1P20020 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
ATP2B1P20020 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2B1P20020 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2B1P20020 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2B1P20020 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
ATP2B1P20020 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2B1P20020 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2B1P20020 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2B1P20020 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2B1P20020 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.55■□□□□ 0.72
ATP2B1P20020 FAAHP1-202ENST00000446499 1238 ntBASIC19.55■□□□□ 0.72
ATP2B1P20020 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2B1P20020 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2B1P20020 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.55■□□□□ 0.72
ATP2B1P20020 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP2B1P20020 AL589182.2-201ENST00000619332 1049 ntBASIC19.55■□□□□ 0.72
ATP2B1P20020 AL031008.1-201ENST00000619963 541 ntBASIC19.55■□□□□ 0.72
ATP2B1P20020 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP2B1P20020 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.55■□□□□ 0.72
ATP2B1P20020 AC148477.8-201ENST00000624298 468 ntBASIC19.55■□□□□ 0.72
ATP2B1P20020 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ATP2B1P20020 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATP2B1P20020 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.55■□□□□ 0.72
ATP2B1P20020 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.55■□□□□ 0.72
ATP2B1P20020 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP2B1P20020 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.55■□□□□ 0.72
ATP2B1P20020 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2B1P20020 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2B1P20020 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.54■□□□□ 0.72
ATP2B1P20020 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.54■□□□□ 0.72
ATP2B1P20020 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2B1P20020 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2B1P20020 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2B1P20020 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.54■□□□□ 0.72
ATP2B1P20020 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2B1P20020 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2B1P20020 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2B1P20020 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ATP2B1P20020 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2B1P20020 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2B1P20020 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.54■□□□□ 0.72
ATP2B1P20020 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2B1P20020 AC073648.2-201ENST00000510116 352 ntBASIC19.54■□□□□ 0.72
ATP2B1P20020 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.54■□□□□ 0.72
ATP2B1P20020 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms