Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM17P0DL12 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC12.69□□□□□ -0.38
SMIM17P0DL12 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.69□□□□□ -0.38
SMIM17P0DL12 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.69□□□□□ -0.38
SMIM17P0DL12 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC12.69□□□□□ -0.38
SMIM17P0DL12 NT5C-210ENST00000582160 860 ntTSL 2 BASIC12.69□□□□□ -0.38
SMIM17P0DL12 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.69□□□□□ -0.38
SMIM17P0DL12 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC12.69□□□□□ -0.38
SMIM17P0DL12 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM17P0DL12 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM17P0DL12 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
SMIM17P0DL12 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM17P0DL12 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SMIM17P0DL12 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SMIM17P0DL12 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.69□□□□□ -0.38
SMIM17P0DL12 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM17P0DL12 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM17P0DL12 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC12.69□□□□□ -0.38
SMIM17P0DL12 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM17P0DL12 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM17P0DL12 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM17P0DL12 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM17P0DL12 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.69□□□□□ -0.38
SMIM17P0DL12 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SMIM17P0DL12 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 AC005104.2-201ENST00000427818 678 ntBASIC12.68□□□□□ -0.38
SMIM17P0DL12 TSPY7P-201ENST00000431358 1114 ntBASIC12.68□□□□□ -0.38
SMIM17P0DL12 KRT18P48-201ENST00000434763 852 ntBASIC12.68□□□□□ -0.38
SMIM17P0DL12 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 AC112698.1-201ENST00000510299 916 ntBASIC12.68□□□□□ -0.38
SMIM17P0DL12 RPS20-210ENST00000523936 899 ntTSL 2 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 AL139327.4-201ENST00000612362 153 ntBASIC12.68□□□□□ -0.38
SMIM17P0DL12 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM17P0DL12 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SMIM17P0DL12 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM17P0DL12 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.67□□□□□ -0.38
SMIM17P0DL12 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM17P0DL12 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM17P0DL12 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
SMIM17P0DL12 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.67□□□□□ -0.38
SMIM17P0DL12 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SMIM17P0DL12 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC12.67□□□□□ -0.38
SMIM17P0DL12 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.67□□□□□ -0.38
SMIM17P0DL12 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM17P0DL12 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM17P0DL12 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM17P0DL12 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM17P0DL12 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM17P0DL12 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM17P0DL12 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms