Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TP73-AS1-210ENST00000637775 1455 ntBASIC14.93□□□□□ -0.02
UBCP0CG48 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBCP0CG48 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.93□□□□□ -0.02
UBCP0CG48 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBCP0CG48 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBCP0CG48 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.92□□□□□ -0.02
UBCP0CG48 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBCP0CG48 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBCP0CG48 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UBCP0CG48 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
UBCP0CG48 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBCP0CG48 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.92□□□□□ -0.02
UBCP0CG48 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBCP0CG48 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UBCP0CG48 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
UBCP0CG48 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
UBCP0CG48 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.92□□□□□ -0.02
UBCP0CG48 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
UBCP0CG48 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
UBCP0CG48 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.92□□□□□ -0.02
UBCP0CG48 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBCP0CG48 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBCP0CG48 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBCP0CG48 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBCP0CG48 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
UBCP0CG48 ACTG1P4-201ENST00000425123 1122 ntBASIC14.92□□□□□ -0.02
UBCP0CG48 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.92□□□□□ -0.02
UBCP0CG48 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
UBCP0CG48 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.92□□□□□ -0.02
UBCP0CG48 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.92□□□□□ -0.02
UBCP0CG48 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.92□□□□□ -0.02
UBCP0CG48 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.92□□□□□ -0.02
UBCP0CG48 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.92□□□□□ -0.02
UBCP0CG48 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.92□□□□□ -0.02
UBCP0CG48 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
UBCP0CG48 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
UBCP0CG48 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBCP0CG48 PCDHB17P-201ENST00000539533 2393 ntBASIC14.92□□□□□ -0.02
UBCP0CG48 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBCP0CG48 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBCP0CG48 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBCP0CG48 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBCP0CG48 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
UBCP0CG48 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.92□□□□□ -0.02
UBCP0CG48 AC026691.1-201ENST00000602502 2017 ntBASIC14.92□□□□□ -0.02
UBCP0CG48 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
UBCP0CG48 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.92□□□□□ -0.02
UBCP0CG48 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UBCP0CG48 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBCP0CG48 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
UBCP0CG48 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UBCP0CG48 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
UBCP0CG48 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBCP0CG48 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UBCP0CG48 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.91□□□□□ -0.02
UBCP0CG48 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.91□□□□□ -0.02
UBCP0CG48 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBCP0CG48 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.91□□□□□ -0.02
UBCP0CG48 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBCP0CG48 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.91□□□□□ -0.02
UBCP0CG48 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBCP0CG48 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.91□□□□□ -0.02
UBCP0CG48 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
UBCP0CG48 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.91□□□□□ -0.02
UBCP0CG48 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBCP0CG48 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.91□□□□□ -0.02
UBCP0CG48 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.91□□□□□ -0.02
UBCP0CG48 SIGLEC30P-201ENST00000455569 941 ntBASIC14.91□□□□□ -0.02
UBCP0CG48 MINOS1P3-201ENST00000457048 203 ntBASIC14.91□□□□□ -0.02
UBCP0CG48 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
UBCP0CG48 AC091607.1-201ENST00000490318 1060 ntBASIC14.91□□□□□ -0.02
UBCP0CG48 AP005901.3-202ENST00000581653 237 ntBASIC14.91□□□□□ -0.02
UBCP0CG48 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBCP0CG48 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBCP0CG48 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBCP0CG48 AC063926.3-201ENST00000624734 5658 ntBASIC14.91□□□□□ -0.02
UBCP0CG48 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
UBCP0CG48 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBCP0CG48 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBCP0CG48 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.91□□□□□ -0.02
UBCP0CG48 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
UBCP0CG48 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.91□□□□□ -0.02
UBCP0CG48 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBCP0CG48 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBCP0CG48 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
UBCP0CG48 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
UBCP0CG48 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
UBCP0CG48 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
UBCP0CG48 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
UBCP0CG48 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.9□□□□□ -0.02
UBCP0CG48 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.9□□□□□ -0.02
UBCP0CG48 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UBCP0CG48 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UBCP0CG48 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.9□□□□□ -0.02
UBCP0CG48 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBCP0CG48 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBCP0CG48 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBCP0CG48 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.9□□□□□ -0.02
UBCP0CG48 AC233702.3-201ENST00000578656 1387 ntBASIC14.9□□□□□ -0.02
UBCP0CG48 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms