Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.85■□□□□ 0.29
PDGFBP01127 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.85■□□□□ 0.29
PDGFBP01127 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFBP01127 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFBP01127 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFBP01127 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFBP01127 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.85■□□□□ 0.29
PDGFBP01127 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.85■□□□□ 0.29
PDGFBP01127 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFBP01127 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFBP01127 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFBP01127 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFBP01127 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFBP01127 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFBP01127 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFBP01127 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.84■□□□□ 0.29
PDGFBP01127 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFBP01127 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFBP01127 LYSMD4-203ENST00000378904 2122 ntBASIC16.84■□□□□ 0.29
PDGFBP01127 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.84■□□□□ 0.29
PDGFBP01127 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PDGFBP01127 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.84■□□□□ 0.29
PDGFBP01127 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFBP01127 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.84■□□□□ 0.29
PDGFBP01127 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.84■□□□□ 0.29
PDGFBP01127 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.84■□□□□ 0.29
PDGFBP01127 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFBP01127 TPRX2P-201ENST00000535362 881 ntBASIC16.84■□□□□ 0.29
PDGFBP01127 AL583810.1-201ENST00000553344 1045 ntBASIC16.84■□□□□ 0.29
PDGFBP01127 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.84■□□□□ 0.29
PDGFBP01127 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFBP01127 SRD5A3P1-201ENST00000603021 949 ntBASIC16.84■□□□□ 0.29
PDGFBP01127 WFDC1-204ENST00000613603 549 ntBASIC16.84■□□□□ 0.29
PDGFBP01127 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.84■□□□□ 0.29
PDGFBP01127 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.84■□□□□ 0.29
PDGFBP01127 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.84■□□□□ 0.29
PDGFBP01127 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFBP01127 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFBP01127 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFBP01127 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFBP01127 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.84■□□□□ 0.29
PDGFBP01127 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFBP01127 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.84■□□□□ 0.29
PDGFBP01127 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFBP01127 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.84■□□□□ 0.29
PDGFBP01127 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFBP01127 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.84■□□□□ 0.29
PDGFBP01127 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFBP01127 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PDGFBP01127 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PDGFBP01127 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PDGFBP01127 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PDGFBP01127 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PDGFBP01127 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFBP01127 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PDGFBP01127 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFBP01127 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFBP01127 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.83■□□□□ 0.28
PDGFBP01127 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFBP01127 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFBP01127 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
PDGFBP01127 AC114501.2-201ENST00000439631 535 ntBASIC16.83■□□□□ 0.28
PDGFBP01127 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PDGFBP01127 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.83■□□□□ 0.28
PDGFBP01127 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.83■□□□□ 0.28
PDGFBP01127 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.83■□□□□ 0.28
PDGFBP01127 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PDGFBP01127 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.83■□□□□ 0.28
PDGFBP01127 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PDGFBP01127 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.83■□□□□ 0.28
PDGFBP01127 WIZP1-201ENST00000531444 2299 ntBASIC16.83■□□□□ 0.28
PDGFBP01127 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.83■□□□□ 0.28
PDGFBP01127 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.83■□□□□ 0.28
PDGFBP01127 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.83■□□□□ 0.28
PDGFBP01127 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.83■□□□□ 0.28
PDGFBP01127 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.83■□□□□ 0.28
PDGFBP01127 MPDU1-223ENST00000582151 728 ntBASIC16.83■□□□□ 0.28
PDGFBP01127 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFBP01127 AC021097.1-201ENST00000607902 574 ntBASIC16.83■□□□□ 0.28
PDGFBP01127 AC244093.1-201ENST00000610837 814 ntBASIC16.83■□□□□ 0.28
PDGFBP01127 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.83■□□□□ 0.28
PDGFBP01127 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFBP01127 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFBP01127 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDGFBP01127 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
PDGFBP01127 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.83■□□□□ 0.28
PDGFBP01127 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PDGFBP01127 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFBP01127 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.82■□□□□ 0.28
PDGFBP01127 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PDGFBP01127 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PDGFBP01127 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFBP01127 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.82■□□□□ 0.28
PDGFBP01127 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFBP01127 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.82■□□□□ 0.28
PDGFBP01127 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PDGFBP01127 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PDGFBP01127 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.82■□□□□ 0.28
PDGFBP01127 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFBP01127 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms