Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.46■□□□□ 0.07
CLPXO76031 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLPXO76031 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLPXO76031 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CLPXO76031 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.46■□□□□ 0.07
CLPXO76031 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLPXO76031 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CLPXO76031 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.46■□□□□ 0.07
CLPXO76031 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.46■□□□□ 0.07
CLPXO76031 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.46■□□□□ 0.07
CLPXO76031 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CLPXO76031 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CLPXO76031 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.46■□□□□ 0.06
CLPXO76031 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.46■□□□□ 0.06
CLPXO76031 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CLPXO76031 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CLPXO76031 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.46■□□□□ 0.06
CLPXO76031 AC013268.4-201ENST00000637413 2228 ntBASIC15.45■□□□□ 0.06
CLPXO76031 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLPXO76031 AC036111.1-201ENST00000533973 1582 ntBASIC15.45■□□□□ 0.06
CLPXO76031 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLPXO76031 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLPXO76031 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLPXO76031 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLPXO76031 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLPXO76031 FLJ16779-201ENST00000612722 7638 ntBASIC15.45■□□□□ 0.06
CLPXO76031 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLPXO76031 CICP13-201ENST00000422015 2789 ntBASIC15.45■□□□□ 0.06
CLPXO76031 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLPXO76031 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.45■□□□□ 0.06
CLPXO76031 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CLPXO76031 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLPXO76031 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLPXO76031 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CLPXO76031 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.45■□□□□ 0.06
CLPXO76031 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLPXO76031 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLPXO76031 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
CLPXO76031 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.45■□□□□ 0.06
CLPXO76031 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CLPXO76031 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLPXO76031 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLPXO76031 TSPY17P-201ENST00000450329 467 ntBASIC15.45■□□□□ 0.06
CLPXO76031 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.45■□□□□ 0.06
CLPXO76031 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.45■□□□□ 0.06
CLPXO76031 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLPXO76031 AC124947.2-201ENST00000547118 1133 ntBASIC15.45■□□□□ 0.06
CLPXO76031 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.45■□□□□ 0.06
CLPXO76031 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.45■□□□□ 0.06
CLPXO76031 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.45■□□□□ 0.06
CLPXO76031 AC008622.2-201ENST00000617006 1229 ntBASIC15.45■□□□□ 0.06
CLPXO76031 AC116562.4-202ENST00000641738 218 ntBASIC15.45■□□□□ 0.06
CLPXO76031 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLPXO76031 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CLPXO76031 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLPXO76031 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLPXO76031 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLPXO76031 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLPXO76031 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.45■□□□□ 0.06
CLPXO76031 ALOX12P2-203ENST00000570921 1945 ntBASIC15.45■□□□□ 0.06
CLPXO76031 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CLPXO76031 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.44■□□□□ 0.06
CLPXO76031 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CLPXO76031 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CLPXO76031 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.44■□□□□ 0.06
CLPXO76031 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPXO76031 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CLPXO76031 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.44■□□□□ 0.06
CLPXO76031 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.44■□□□□ 0.06
CLPXO76031 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CLPXO76031 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CLPXO76031 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPXO76031 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPXO76031 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.44■□□□□ 0.06
CLPXO76031 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPXO76031 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.44■□□□□ 0.06
CLPXO76031 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPXO76031 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLPXO76031 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.44■□□□□ 0.06
CLPXO76031 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CLPXO76031 KRT18P57-201ENST00000443599 1254 ntBASIC15.44■□□□□ 0.06
CLPXO76031 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.44■□□□□ 0.06
CLPXO76031 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.44■□□□□ 0.06
CLPXO76031 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CLPXO76031 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPXO76031 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPXO76031 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPXO76031 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CLPXO76031 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.44■□□□□ 0.06
CLPXO76031 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPXO76031 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CLPXO76031 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPXO76031 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLPXO76031 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPXO76031 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.44■□□□□ 0.06
CLPXO76031 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.44■□□□□ 0.06
CLPXO76031 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPXO76031 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPXO76031 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLPXO76031 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms