Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PEX1O43933 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PEX1O43933 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PEX1O43933 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.6■□□□□ 0.25
PEX1O43933 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.6■□□□□ 0.25
PEX1O43933 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PEX1O43933 KRT17P6-201ENST00000453795 1220 ntBASIC16.6■□□□□ 0.25
PEX1O43933 AC113404.2-201ENST00000507884 177 ntBASIC16.6■□□□□ 0.25
PEX1O43933 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.6■□□□□ 0.25
PEX1O43933 FOSL1P1-201ENST00000511041 816 ntBASIC16.6■□□□□ 0.25
PEX1O43933 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.6■□□□□ 0.25
PEX1O43933 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.6■□□□□ 0.25
PEX1O43933 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.6■□□□□ 0.25
PEX1O43933 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PEX1O43933 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PEX1O43933 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PEX1O43933 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.6■□□□□ 0.25
PEX1O43933 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
PEX1O43933 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PEX1O43933 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PEX1O43933 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PEX1O43933 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.6■□□□□ 0.25
PEX1O43933 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PEX1O43933 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PEX1O43933 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.6■□□□□ 0.25
PEX1O43933 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
PEX1O43933 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PEX1O43933 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PEX1O43933 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PEX1O43933 RNF216P1-203ENST00000404404 2427 ntBASIC16.59■□□□□ 0.25
PEX1O43933 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PEX1O43933 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
PEX1O43933 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PEX1O43933 AC046185.3-201ENST00000623228 1824 ntBASIC16.59■□□□□ 0.25
PEX1O43933 AL024508.2-201ENST00000607749 1894 ntBASIC16.59■□□□□ 0.25
PEX1O43933 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PEX1O43933 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.59■□□□□ 0.25
PEX1O43933 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PEX1O43933 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PEX1O43933 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PEX1O43933 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PEX1O43933 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PEX1O43933 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.59■□□□□ 0.25
PEX1O43933 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PEX1O43933 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.59■□□□□ 0.25
PEX1O43933 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PEX1O43933 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.59■□□□□ 0.25
PEX1O43933 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.59■□□□□ 0.25
PEX1O43933 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PEX1O43933 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.59■□□□□ 0.25
PEX1O43933 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PEX1O43933 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.59■□□□□ 0.25
PEX1O43933 TSPY19P-201ENST00000418461 509 ntBASIC16.59■□□□□ 0.25
PEX1O43933 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PEX1O43933 AC026396.1-201ENST00000419388 421 ntBASIC16.59■□□□□ 0.25
PEX1O43933 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.59■□□□□ 0.25
PEX1O43933 TSPY18P-201ENST00000441642 509 ntBASIC16.59■□□□□ 0.25
PEX1O43933 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PEX1O43933 AC091304.2-201ENST00000564639 760 ntBASIC16.59■□□□□ 0.25
PEX1O43933 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.59■□□□□ 0.25
PEX1O43933 RN7SL510P-201ENST00000581311 263 ntBASIC16.59■□□□□ 0.25
PEX1O43933 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.59■□□□□ 0.25
PEX1O43933 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.59■□□□□ 0.25
PEX1O43933 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PEX1O43933 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.59■□□□□ 0.25
PEX1O43933 AC116407.2-201ENST00000613639 860 ntBASIC16.59■□□□□ 0.25
PEX1O43933 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.59■□□□□ 0.25
PEX1O43933 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.59■□□□□ 0.25
PEX1O43933 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PEX1O43933 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PEX1O43933 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.59■□□□□ 0.25
PEX1O43933 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PEX1O43933 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.59■□□□□ 0.25
PEX1O43933 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PEX1O43933 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PEX1O43933 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PEX1O43933 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PEX1O43933 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.59■□□□□ 0.25
PEX1O43933 LINC02012-201ENST00000608206 1725 ntBASIC16.59■□□□□ 0.25
PEX1O43933 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PEX1O43933 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PEX1O43933 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PEX1O43933 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PEX1O43933 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PEX1O43933 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PEX1O43933 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PEX1O43933 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PEX1O43933 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PEX1O43933 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.58■□□□□ 0.25
PEX1O43933 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PEX1O43933 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PEX1O43933 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PEX1O43933 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.58■□□□□ 0.24
PEX1O43933 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
PEX1O43933 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.58■□□□□ 0.24
PEX1O43933 UNC93B7-201ENST00000509439 705 ntBASIC16.58■□□□□ 0.24
PEX1O43933 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PEX1O43933 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.58■□□□□ 0.24
PEX1O43933 LINC01711-201ENST00000598340 967 ntBASIC16.58■□□□□ 0.24
PEX1O43933 AC099336.1-202ENST00000602961 463 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms