Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA6Q9Y5G7 AC010980.1-201ENST00000587192 1142 ntBASIC23.1■■□□□ 1.29
PCDHGA6Q9Y5G7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA6Q9Y5G7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHGA6Q9Y5G7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDHGA6Q9Y5G7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDHGA6Q9Y5G7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGA6Q9Y5G7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDHGA6Q9Y5G7 WHAMMP3-201ENST00000611636 1609 ntBASIC23.09■■□□□ 1.29
PCDHGA6Q9Y5G7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGA6Q9Y5G7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGA6Q9Y5G7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGA6Q9Y5G7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGA6Q9Y5G7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGA6Q9Y5G7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGA6Q9Y5G7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.08■■□□□ 1.29
PCDHGA6Q9Y5G7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.08■■□□□ 1.29
PCDHGA6Q9Y5G7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.08■■□□□ 1.29
PCDHGA6Q9Y5G7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGA6Q9Y5G7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDHGA6Q9Y5G7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.07■■□□□ 1.28
PCDHGA6Q9Y5G7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGA6Q9Y5G7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGA6Q9Y5G7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.07■■□□□ 1.28
PCDHGA6Q9Y5G7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGA6Q9Y5G7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDHGA6Q9Y5G7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGA6Q9Y5G7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGA6Q9Y5G7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGA6Q9Y5G7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.06■■□□□ 1.28
PCDHGA6Q9Y5G7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
PCDHGA6Q9Y5G7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
PCDHGA6Q9Y5G7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDHGA6Q9Y5G7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGA6Q9Y5G7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
PCDHGA6Q9Y5G7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGA6Q9Y5G7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.06■■□□□ 1.28
PCDHGA6Q9Y5G7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGA6Q9Y5G7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGA6Q9Y5G7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGA6Q9Y5G7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
PCDHGA6Q9Y5G7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGA6Q9Y5G7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGA6Q9Y5G7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.05■■□□□ 1.28
PCDHGA6Q9Y5G7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGA6Q9Y5G7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHGA6Q9Y5G7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHGA6Q9Y5G7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGA6Q9Y5G7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHGA6Q9Y5G7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGA6Q9Y5G7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
PCDHGA6Q9Y5G7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGA6Q9Y5G7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHGA6Q9Y5G7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDHGA6Q9Y5G7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDHGA6Q9Y5G7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHGA6Q9Y5G7 YBX1P4-201ENST00000392794 808 ntBASIC23.03■■□□□ 1.28
PCDHGA6Q9Y5G7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHGA6Q9Y5G7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGA6Q9Y5G7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGA6Q9Y5G7 AC103834.1-201ENST00000520383 144 ntBASIC23.02■■□□□ 1.28
PCDHGA6Q9Y5G7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
PCDHGA6Q9Y5G7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
PCDHGA6Q9Y5G7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.01■■□□□ 1.27
PCDHGA6Q9Y5G7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.01■■□□□ 1.27
PCDHGA6Q9Y5G7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHGA6Q9Y5G7 AC020928.2-201ENST00000588717 2197 ntBASIC23.01■■□□□ 1.27
PCDHGA6Q9Y5G7 KRT8P33-201ENST00000508125 1423 ntBASIC23■■□□□ 1.27
PCDHGA6Q9Y5G7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23■■□□□ 1.27
PCDHGA6Q9Y5G7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23■■□□□ 1.27
PCDHGA6Q9Y5G7 AC145676.1-201ENST00000514988 2004 ntBASIC23■■□□□ 1.27
PCDHGA6Q9Y5G7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23■■□□□ 1.27
PCDHGA6Q9Y5G7 MIR4508-201ENST00000584178 70 ntBASIC23■■□□□ 1.27
PCDHGA6Q9Y5G7 PVT1_1.1-201ENST00000615125 194 ntBASIC23■■□□□ 1.27
PCDHGA6Q9Y5G7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23■■□□□ 1.27
PCDHGA6Q9Y5G7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGA6Q9Y5G7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGA6Q9Y5G7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGA6Q9Y5G7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHGA6Q9Y5G7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHGA6Q9Y5G7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.99■■□□□ 1.27
PCDHGA6Q9Y5G7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.99■■□□□ 1.27
PCDHGA6Q9Y5G7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHGA6Q9Y5G7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHGA6Q9Y5G7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHGA6Q9Y5G7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGA6Q9Y5G7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.98■■□□□ 1.27
PCDHGA6Q9Y5G7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGA6Q9Y5G7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.98■■□□□ 1.27
PCDHGA6Q9Y5G7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.98■■□□□ 1.27
PCDHGA6Q9Y5G7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGA6Q9Y5G7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGA6Q9Y5G7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGA6Q9Y5G7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
PCDHGA6Q9Y5G7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGA6Q9Y5G7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGA6Q9Y5G7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGA6Q9Y5G7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.97■■□□□ 1.27
PCDHGA6Q9Y5G7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGA6Q9Y5G7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms