Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.05■□□□□ 0.8
KCNIP1Q9NZI2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.05■□□□□ 0.8
KCNIP1Q9NZI2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
KCNIP1Q9NZI2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNIP1Q9NZI2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
KCNIP1Q9NZI2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KCNIP1Q9NZI2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KCNIP1Q9NZI2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
KCNIP1Q9NZI2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.04■□□□□ 0.8
KCNIP1Q9NZI2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
KCNIP1Q9NZI2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNIP1Q9NZI2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
KCNIP1Q9NZI2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNIP1Q9NZI2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
KCNIP1Q9NZI2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.03■□□□□ 0.8
KCNIP1Q9NZI2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNIP1Q9NZI2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KCNIP1Q9NZI2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.03■□□□□ 0.8
KCNIP1Q9NZI2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNIP1Q9NZI2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KCNIP1Q9NZI2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KCNIP1Q9NZI2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNIP1Q9NZI2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KCNIP1Q9NZI2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KCNIP1Q9NZI2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KCNIP1Q9NZI2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KCNIP1Q9NZI2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNIP1Q9NZI2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNIP1Q9NZI2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNIP1Q9NZI2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNIP1Q9NZI2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.02■□□□□ 0.8
KCNIP1Q9NZI2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KCNIP1Q9NZI2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
KCNIP1Q9NZI2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
KCNIP1Q9NZI2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.02■□□□□ 0.79
KCNIP1Q9NZI2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
KCNIP1Q9NZI2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
KCNIP1Q9NZI2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.01■□□□□ 0.79
KCNIP1Q9NZI2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
KCNIP1Q9NZI2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KCNIP1Q9NZI2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KCNIP1Q9NZI2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KCNIP1Q9NZI2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KCNIP1Q9NZI2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KCNIP1Q9NZI2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.01■□□□□ 0.79
KCNIP1Q9NZI2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
KCNIP1Q9NZI2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KCNIP1Q9NZI2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.01■□□□□ 0.79
KCNIP1Q9NZI2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
KCNIP1Q9NZI2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
KCNIP1Q9NZI2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KCNIP1Q9NZI2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20■□□□□ 0.79
KCNIP1Q9NZI2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20■□□□□ 0.79
KCNIP1Q9NZI2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20■□□□□ 0.79
KCNIP1Q9NZI2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20■□□□□ 0.79
KCNIP1Q9NZI2 AC096887.2-201ENST00000623443 1957 ntBASIC20■□□□□ 0.79
KCNIP1Q9NZI2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KCNIP1Q9NZI2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20■□□□□ 0.79
KCNIP1Q9NZI2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20■□□□□ 0.79
KCNIP1Q9NZI2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
KCNIP1Q9NZI2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KCNIP1Q9NZI2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.99■□□□□ 0.79
KCNIP1Q9NZI2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KCNIP1Q9NZI2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.99■□□□□ 0.79
KCNIP1Q9NZI2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.99■□□□□ 0.79
KCNIP1Q9NZI2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KCNIP1Q9NZI2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
KCNIP1Q9NZI2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.98■□□□□ 0.79
KCNIP1Q9NZI2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KCNIP1Q9NZI2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KCNIP1Q9NZI2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KCNIP1Q9NZI2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KCNIP1Q9NZI2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
KCNIP1Q9NZI2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KCNIP1Q9NZI2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KCNIP1Q9NZI2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KCNIP1Q9NZI2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
KCNIP1Q9NZI2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KCNIP1Q9NZI2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.97■□□□□ 0.79
KCNIP1Q9NZI2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
KCNIP1Q9NZI2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KCNIP1Q9NZI2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KCNIP1Q9NZI2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KCNIP1Q9NZI2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.96■□□□□ 0.79
KCNIP1Q9NZI2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.96■□□□□ 0.79
KCNIP1Q9NZI2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.96■□□□□ 0.79
KCNIP1Q9NZI2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KCNIP1Q9NZI2 AC142381.3-201ENST00000568208 1670 ntBASIC19.96■□□□□ 0.79
KCNIP1Q9NZI2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KCNIP1Q9NZI2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KCNIP1Q9NZI2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
KCNIP1Q9NZI2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KCNIP1Q9NZI2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KCNIP1Q9NZI2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KCNIP1Q9NZI2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
KCNIP1Q9NZI2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KCNIP1Q9NZI2 MIR639-201ENST00000384974 98 ntBASIC19.95■□□□□ 0.78
KCNIP1Q9NZI2 MIR3960-201ENST00000583311 91 ntBASIC19.95■□□□□ 0.78
KCNIP1Q9NZI2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
KCNIP1Q9NZI2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms