Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GSX1Q9H4S2 AL136116.3-201ENST00000402907 1138 ntBASIC20.36■□□□□ 0.85
GSX1Q9H4S2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
GSX1Q9H4S2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.36■□□□□ 0.85
GSX1Q9H4S2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GSX1Q9H4S2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GSX1Q9H4S2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.35■□□□□ 0.85
GSX1Q9H4S2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
GSX1Q9H4S2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GSX1Q9H4S2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GSX1Q9H4S2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
GSX1Q9H4S2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.33■□□□□ 0.85
GSX1Q9H4S2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.33■□□□□ 0.85
GSX1Q9H4S2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.33■□□□□ 0.85
GSX1Q9H4S2 RARRES2P6-201ENST00000567333 442 ntBASIC20.33■□□□□ 0.85
GSX1Q9H4S2 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.33■□□□□ 0.85
GSX1Q9H4S2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.33■□□□□ 0.85
GSX1Q9H4S2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
GSX1Q9H4S2 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.33■□□□□ 0.84
GSX1Q9H4S2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
GSX1Q9H4S2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
GSX1Q9H4S2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GSX1Q9H4S2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GSX1Q9H4S2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.32■□□□□ 0.84
GSX1Q9H4S2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.32■□□□□ 0.84
GSX1Q9H4S2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
GSX1Q9H4S2 AC087393.1-201ENST00000582896 145 ntBASIC20.32■□□□□ 0.84
GSX1Q9H4S2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.32■□□□□ 0.84
GSX1Q9H4S2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.32■□□□□ 0.84
GSX1Q9H4S2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
GSX1Q9H4S2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
GSX1Q9H4S2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.31■□□□□ 0.84
GSX1Q9H4S2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.31■□□□□ 0.84
GSX1Q9H4S2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GSX1Q9H4S2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
GSX1Q9H4S2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GSX1Q9H4S2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GSX1Q9H4S2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GSX1Q9H4S2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GSX1Q9H4S2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.3■□□□□ 0.84
GSX1Q9H4S2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GSX1Q9H4S2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
GSX1Q9H4S2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
GSX1Q9H4S2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GSX1Q9H4S2 AC096631.2-201ENST00000436136 790 ntBASIC20.29■□□□□ 0.84
GSX1Q9H4S2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.29■□□□□ 0.84
GSX1Q9H4S2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GSX1Q9H4S2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.29■□□□□ 0.84
GSX1Q9H4S2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GSX1Q9H4S2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
GSX1Q9H4S2 DRD5P2-201ENST00000421395 2012 ntBASIC20.28■□□□□ 0.84
GSX1Q9H4S2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GSX1Q9H4S2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.28■□□□□ 0.84
GSX1Q9H4S2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GSX1Q9H4S2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
GSX1Q9H4S2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GSX1Q9H4S2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GSX1Q9H4S2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GSX1Q9H4S2 ZNRF2P3-201ENST00000424200 374 ntBASIC20.27■□□□□ 0.84
GSX1Q9H4S2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GSX1Q9H4S2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GSX1Q9H4S2 AC142086.6-201ENST00000621154 1765 ntBASIC20.26■□□□□ 0.83
GSX1Q9H4S2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GSX1Q9H4S2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
GSX1Q9H4S2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
GSX1Q9H4S2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.26■□□□□ 0.83
GSX1Q9H4S2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.26■□□□□ 0.83
GSX1Q9H4S2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.26■□□□□ 0.83
GSX1Q9H4S2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GSX1Q9H4S2 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GSX1Q9H4S2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GSX1Q9H4S2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.25■□□□□ 0.83
GSX1Q9H4S2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.25■□□□□ 0.83
GSX1Q9H4S2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GSX1Q9H4S2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.24■□□□□ 0.83
GSX1Q9H4S2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GSX1Q9H4S2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
GSX1Q9H4S2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
GSX1Q9H4S2 AC104564.3-201ENST00000582367 638 ntBASIC20.24■□□□□ 0.83
GSX1Q9H4S2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GSX1Q9H4S2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.24■□□□□ 0.83
GSX1Q9H4S2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GSX1Q9H4S2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.24■□□□□ 0.83
GSX1Q9H4S2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GSX1Q9H4S2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GSX1Q9H4S2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.23■□□□□ 0.83
GSX1Q9H4S2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
GSX1Q9H4S2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GSX1Q9H4S2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.23■□□□□ 0.83
GSX1Q9H4S2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GSX1Q9H4S2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GSX1Q9H4S2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
GSX1Q9H4S2 RPS2P7-201ENST00000447334 885 ntBASIC20.22■□□□□ 0.83
GSX1Q9H4S2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GSX1Q9H4S2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GSX1Q9H4S2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GSX1Q9H4S2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GSX1Q9H4S2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.21■□□□□ 0.83
GSX1Q9H4S2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GSX1Q9H4S2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms