Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 AP004833.2-201ENST00000532228 1454 ntBASIC16.92■□□□□ 0.3
LYSTQ99698 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.92■□□□□ 0.3
LYSTQ99698 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSTQ99698 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.92■□□□□ 0.3
LYSTQ99698 MIR5787-201ENST00000611784 55 ntBASIC16.92■□□□□ 0.3
LYSTQ99698 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSTQ99698 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC16.91■□□□□ 0.3
LYSTQ99698 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.91■□□□□ 0.3
LYSTQ99698 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.91■□□□□ 0.3
LYSTQ99698 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.91■□□□□ 0.3
LYSTQ99698 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSTQ99698 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSTQ99698 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.9■□□□□ 0.3
LYSTQ99698 BX664725.1-201ENST00000438252 379 ntBASIC16.9■□□□□ 0.3
LYSTQ99698 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.9■□□□□ 0.3
LYSTQ99698 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSTQ99698 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC16.9■□□□□ 0.3
LYSTQ99698 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.9■□□□□ 0.3
LYSTQ99698 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
LYSTQ99698 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSTQ99698 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
LYSTQ99698 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
LYSTQ99698 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC16.9■□□□□ 0.3
LYSTQ99698 WHAMMP3-201ENST00000611636 1609 ntBASIC16.9■□□□□ 0.3
LYSTQ99698 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LYSTQ99698 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSTQ99698 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSTQ99698 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSTQ99698 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LYSTQ99698 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.89■□□□□ 0.29
LYSTQ99698 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LYSTQ99698 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
LYSTQ99698 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
LYSTQ99698 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.89■□□□□ 0.29
LYSTQ99698 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.89■□□□□ 0.29
LYSTQ99698 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.88■□□□□ 0.29
LYSTQ99698 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.88■□□□□ 0.29
LYSTQ99698 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSTQ99698 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LYSTQ99698 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC16.88■□□□□ 0.29
LYSTQ99698 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC16.88■□□□□ 0.29
LYSTQ99698 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LYSTQ99698 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSTQ99698 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSTQ99698 AC090192.1-201ENST00000517740 490 ntBASIC16.87■□□□□ 0.29
LYSTQ99698 ST7-205ENST00000393446 2114 ntTSL 5 BASIC16.87■□□□□ 0.29
LYSTQ99698 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LYSTQ99698 AC092028.1-203ENST00000608262 953 ntBASIC16.87■□□□□ 0.29
LYSTQ99698 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSTQ99698 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
LYSTQ99698 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
LYSTQ99698 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSTQ99698 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC16.86■□□□□ 0.29
LYSTQ99698 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.86■□□□□ 0.29
LYSTQ99698 MIR6821-201ENST00000617625 74 ntBASIC16.86■□□□□ 0.29
LYSTQ99698 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.86■□□□□ 0.29
LYSTQ99698 SUDS3P1-201ENST00000505831 966 ntBASIC16.86■□□□□ 0.29
LYSTQ99698 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSTQ99698 RPS2P7-201ENST00000447334 885 ntBASIC16.85■□□□□ 0.29
LYSTQ99698 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSTQ99698 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC16.85■□□□□ 0.29
LYSTQ99698 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSTQ99698 AC021242.3-201ENST00000607598 1377 ntBASIC16.85■□□□□ 0.29
LYSTQ99698 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSTQ99698 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSTQ99698 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LYSTQ99698 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.85■□□□□ 0.29
LYSTQ99698 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.85■□□□□ 0.29
LYSTQ99698 AC137630.3-201ENST00000607245 391 ntBASIC16.85■□□□□ 0.29
LYSTQ99698 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
LYSTQ99698 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.85■□□□□ 0.29
LYSTQ99698 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LYSTQ99698 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LYSTQ99698 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LYSTQ99698 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.84■□□□□ 0.29
LYSTQ99698 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LYSTQ99698 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
LYSTQ99698 TSPY9P-201ENST00000440215 945 ntBASIC16.83■□□□□ 0.29
LYSTQ99698 TSPY11P-201ENST00000442607 1045 ntBASIC16.83■□□□□ 0.29
LYSTQ99698 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.83■□□□□ 0.29
LYSTQ99698 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
LYSTQ99698 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LYSTQ99698 AL162430.1-201ENST00000480705 870 ntBASIC16.83■□□□□ 0.28
LYSTQ99698 AC106739.1-201ENST00000617035 715 ntBASIC16.83■□□□□ 0.28
LYSTQ99698 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
LYSTQ99698 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC16.83■□□□□ 0.28
LYSTQ99698 AL449106.1-201ENST00000608517 1980 ntBASIC16.83■□□□□ 0.28
LYSTQ99698 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LYSTQ99698 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.82■□□□□ 0.28
LYSTQ99698 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LYSTQ99698 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSTQ99698 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
LYSTQ99698 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
LYSTQ99698 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSTQ99698 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC16.82■□□□□ 0.28
LYSTQ99698 AP002414.2-202ENST00000590929 1450 ntBASIC16.82■□□□□ 0.28
LYSTQ99698 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSTQ99698 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.81■□□□□ 0.28
LYSTQ99698 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSTQ99698 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms