Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC29.82■■■□□ 2.36
SNED1Q8TER0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC29.81■■■□□ 2.36
SNED1Q8TER0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC29.81■■■□□ 2.36
SNED1Q8TER0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC29.81■■■□□ 2.36
SNED1Q8TER0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SNED1Q8TER0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
SNED1Q8TER0 AC021242.3-201ENST00000607598 1377 ntBASIC29.81■■■□□ 2.36
SNED1Q8TER0 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
SNED1Q8TER0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SNED1Q8TER0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
SNED1Q8TER0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
SNED1Q8TER0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SNED1Q8TER0 AC131281.2-201ENST00000520478 145 ntBASIC29.79■■■□□ 2.36
SNED1Q8TER0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC29.79■■■□□ 2.36
SNED1Q8TER0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC29.79■■■□□ 2.36
SNED1Q8TER0 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SNED1Q8TER0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC29.79■■■□□ 2.36
SNED1Q8TER0 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
SNED1Q8TER0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SNED1Q8TER0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC29.79■■■□□ 2.36
SNED1Q8TER0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC29.79■■■□□ 2.36
SNED1Q8TER0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC29.79■■■□□ 2.36
SNED1Q8TER0 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SNED1Q8TER0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
SNED1Q8TER0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SNED1Q8TER0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SNED1Q8TER0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC29.77■■■□□ 2.36
SNED1Q8TER0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SNED1Q8TER0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
SNED1Q8TER0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
SNED1Q8TER0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
SNED1Q8TER0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
SNED1Q8TER0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC29.76■■■□□ 2.35
SNED1Q8TER0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC29.76■■■□□ 2.35
SNED1Q8TER0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SNED1Q8TER0 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC29.74■■■□□ 2.35
SNED1Q8TER0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SNED1Q8TER0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SNED1Q8TER0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC29.74■■■□□ 2.35
SNED1Q8TER0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
SNED1Q8TER0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SNED1Q8TER0 AL449106.1-201ENST00000608517 1980 ntBASIC29.74■■■□□ 2.35
SNED1Q8TER0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC29.74■■■□□ 2.35
SNED1Q8TER0 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
SNED1Q8TER0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
SNED1Q8TER0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
SNED1Q8TER0 AC139426.1-201ENST00000568218 2529 ntBASIC29.71■■■□□ 2.35
SNED1Q8TER0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC29.71■■■□□ 2.35
SNED1Q8TER0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SNED1Q8TER0 AC120024.1-201ENST00000562672 995 ntBASIC29.71■■■□□ 2.35
SNED1Q8TER0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SNED1Q8TER0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC29.71■■■□□ 2.35
SNED1Q8TER0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC29.71■■■□□ 2.35
SNED1Q8TER0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC29.71■■■□□ 2.35
SNED1Q8TER0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SNED1Q8TER0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC29.7■■■□□ 2.34
SNED1Q8TER0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC29.7■■■□□ 2.34
SNED1Q8TER0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
SNED1Q8TER0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.69■■■□□ 2.34
SNED1Q8TER0 KRT18P10-201ENST00000388836 1287 ntBASIC29.69■■■□□ 2.34
SNED1Q8TER0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
SNED1Q8TER0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC29.69■■■□□ 2.34
SNED1Q8TER0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC29.69■■■□□ 2.34
SNED1Q8TER0 AL139246.5-201ENST00000606645 996 ntBASIC29.69■■■□□ 2.34
SNED1Q8TER0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC29.68■■■□□ 2.34
SNED1Q8TER0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC29.68■■■□□ 2.34
SNED1Q8TER0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC29.68■■■□□ 2.34
SNED1Q8TER0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC29.68■■■□□ 2.34
SNED1Q8TER0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC29.68■■■□□ 2.34
SNED1Q8TER0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC29.67■■■□□ 2.34
SNED1Q8TER0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SNED1Q8TER0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
SNED1Q8TER0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
SNED1Q8TER0 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
SNED1Q8TER0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SNED1Q8TER0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC29.66■■■□□ 2.34
SNED1Q8TER0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
SNED1Q8TER0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC29.65■■■□□ 2.34
SNED1Q8TER0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
SNED1Q8TER0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC29.65■■■□□ 2.34
SNED1Q8TER0 TSPY9P-201ENST00000440215 945 ntBASIC29.65■■■□□ 2.34
SNED1Q8TER0 TSPY11P-201ENST00000442607 1045 ntBASIC29.65■■■□□ 2.34
SNED1Q8TER0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC29.65■■■□□ 2.34
SNED1Q8TER0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC29.65■■■□□ 2.34
SNED1Q8TER0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC29.65■■■□□ 2.34
SNED1Q8TER0 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC29.65■■■□□ 2.34
SNED1Q8TER0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC29.65■■■□□ 2.34
SNED1Q8TER0 MIR4281-201ENST00000580852 62 ntBASIC29.64■■■□□ 2.34
SNED1Q8TER0 AC092028.1-203ENST00000608262 953 ntBASIC29.64■■■□□ 2.34
SNED1Q8TER0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
SNED1Q8TER0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC29.63■■■□□ 2.33
SNED1Q8TER0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC29.63■■■□□ 2.33
SNED1Q8TER0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
SNED1Q8TER0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
SNED1Q8TER0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SNED1Q8TER0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SNED1Q8TER0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC29.62■■■□□ 2.33
SNED1Q8TER0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC29.62■■■□□ 2.33
SNED1Q8TER0 RALB-208ENST00000631312 311 ntTSL 5 BASIC29.62■■■□□ 2.33
SNED1Q8TER0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms