Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC35.77■■■■□ 3.32
CCER1Q8TC90 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
CCER1Q8TC90 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC35.76■■■■□ 3.32
CCER1Q8TC90 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.31
CCER1Q8TC90 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC35.76■■■■□ 3.31
CCER1Q8TC90 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.31
CCER1Q8TC90 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC35.75■■■■□ 3.31
CCER1Q8TC90 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
CCER1Q8TC90 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC35.75■■■■□ 3.31
CCER1Q8TC90 GDI1-215ENST00000630693 786 ntTSL 4 BASIC35.75■■■■□ 3.31
CCER1Q8TC90 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
CCER1Q8TC90 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC35.74■■■■□ 3.31
CCER1Q8TC90 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC35.73■■■■□ 3.31
CCER1Q8TC90 MIR3648-2-201ENST00000581792 180 ntBASIC35.73■■■■□ 3.31
CCER1Q8TC90 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC35.73■■■■□ 3.31
CCER1Q8TC90 MIR3648-1-201ENST00000615959 180 ntBASIC35.73■■■■□ 3.31
CCER1Q8TC90 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC35.73■■■■□ 3.31
CCER1Q8TC90 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC35.72■■■■□ 3.31
CCER1Q8TC90 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC35.72■■■■□ 3.31
CCER1Q8TC90 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
CCER1Q8TC90 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC35.72■■■■□ 3.31
CCER1Q8TC90 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
CCER1Q8TC90 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC35.71■■■■□ 3.31
CCER1Q8TC90 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
CCER1Q8TC90 PREB-202ENST00000406567 1910 ntTSL 5 BASIC35.7■■■■□ 3.31
CCER1Q8TC90 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC35.7■■■■□ 3.31
CCER1Q8TC90 METRNL-202ENST00000570778 967 ntTSL 5 BASIC35.7■■■■□ 3.31
CCER1Q8TC90 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC35.7■■■■□ 3.31
CCER1Q8TC90 AL139125.2-201ENST00000623134 1869 ntBASIC35.7■■■■□ 3.31
CCER1Q8TC90 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC35.7■■■■□ 3.3
CCER1Q8TC90 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
CCER1Q8TC90 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC35.69■■■■□ 3.3
CCER1Q8TC90 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
CCER1Q8TC90 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
CCER1Q8TC90 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC35.68■■■■□ 3.3
CCER1Q8TC90 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
CCER1Q8TC90 AC126177.7-201ENST00000547904 679 ntBASIC35.67■■■■□ 3.3
CCER1Q8TC90 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CCER1Q8TC90 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC35.66■■■■□ 3.3
CCER1Q8TC90 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CCER1Q8TC90 AC016575.1-201ENST00000607026 382 ntBASIC35.66■■■■□ 3.3
CCER1Q8TC90 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC35.66■■■■□ 3.3
CCER1Q8TC90 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
CCER1Q8TC90 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CCER1Q8TC90 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
CCER1Q8TC90 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC35.65■■■■□ 3.3
CCER1Q8TC90 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
CCER1Q8TC90 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
CCER1Q8TC90 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC35.64■■■■□ 3.3
CCER1Q8TC90 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC35.64■■■■□ 3.3
CCER1Q8TC90 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
CCER1Q8TC90 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC35.64■■■■□ 3.3
CCER1Q8TC90 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC35.63■■■■□ 3.29
CCER1Q8TC90 THRA-202ENST00000394121 2260 ntTSL 2 BASIC35.63■■■■□ 3.29
CCER1Q8TC90 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
CCER1Q8TC90 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC35.62■■■■□ 3.29
CCER1Q8TC90 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
CCER1Q8TC90 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
CCER1Q8TC90 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
CCER1Q8TC90 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
CCER1Q8TC90 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC35.61■■■■□ 3.29
CCER1Q8TC90 MACF1-219ENST00000484793 834 ntTSL 2 BASIC35.61■■■■□ 3.29
CCER1Q8TC90 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC35.61■■■■□ 3.29
CCER1Q8TC90 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
CCER1Q8TC90 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
CCER1Q8TC90 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
CCER1Q8TC90 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
CCER1Q8TC90 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
CCER1Q8TC90 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
CCER1Q8TC90 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC35.59■■■■□ 3.29
CCER1Q8TC90 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC35.59■■■■□ 3.29
CCER1Q8TC90 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
CCER1Q8TC90 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC35.58■■■■□ 3.29
CCER1Q8TC90 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.29
CCER1Q8TC90 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC35.57■■■■□ 3.29
CCER1Q8TC90 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC35.57■■■■□ 3.28
CCER1Q8TC90 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC35.57■■■■□ 3.28
CCER1Q8TC90 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC35.56■■■■□ 3.28
CCER1Q8TC90 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
CCER1Q8TC90 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC35.56■■■■□ 3.28
CCER1Q8TC90 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
CCER1Q8TC90 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC35.55■■■■□ 3.28
CCER1Q8TC90 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
CCER1Q8TC90 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC35.55■■■■□ 3.28
CCER1Q8TC90 AC097639.1-201ENST00000565519 1891 ntBASIC35.55■■■■□ 3.28
CCER1Q8TC90 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC35.55■■■■□ 3.28
CCER1Q8TC90 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC35.55■■■■□ 3.28
CCER1Q8TC90 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
CCER1Q8TC90 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
CCER1Q8TC90 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
CCER1Q8TC90 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
CCER1Q8TC90 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
CCER1Q8TC90 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
CCER1Q8TC90 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC35.54■■■■□ 3.28
CCER1Q8TC90 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC35.53■■■■□ 3.28
CCER1Q8TC90 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC35.53■■■■□ 3.28
CCER1Q8TC90 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC35.53■■■■□ 3.28
CCER1Q8TC90 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
CCER1Q8TC90 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
CCER1Q8TC90 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms