Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC27.27■■□□□ 1.96
RETREG2Q8NC44 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC27.27■■□□□ 1.96
RETREG2Q8NC44 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RETREG2Q8NC44 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC27.27■■□□□ 1.96
RETREG2Q8NC44 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RETREG2Q8NC44 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RETREG2Q8NC44 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RETREG2Q8NC44 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RETREG2Q8NC44 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.26■■□□□ 1.95
RETREG2Q8NC44 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.26■■□□□ 1.95
RETREG2Q8NC44 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RETREG2Q8NC44 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC27.25■■□□□ 1.95
RETREG2Q8NC44 PVT1_1.1-201ENST00000615125 194 ntBASIC27.25■■□□□ 1.95
RETREG2Q8NC44 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC27.25■■□□□ 1.95
RETREG2Q8NC44 AL592295.1-201ENST00000400984 884 ntBASIC27.24■■□□□ 1.95
RETREG2Q8NC44 HES6-204ENST00000409182 863 ntTSL 2 BASIC27.24■■□□□ 1.95
RETREG2Q8NC44 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
RETREG2Q8NC44 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RETREG2Q8NC44 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC27.23■■□□□ 1.95
RETREG2Q8NC44 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
RETREG2Q8NC44 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RETREG2Q8NC44 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC27.23■■□□□ 1.95
RETREG2Q8NC44 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RETREG2Q8NC44 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RETREG2Q8NC44 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RETREG2Q8NC44 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RETREG2Q8NC44 IDNK-203ENST00000405990 629 ntTSL 2 BASIC27.21■■□□□ 1.95
RETREG2Q8NC44 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
RETREG2Q8NC44 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC27.21■■□□□ 1.95
RETREG2Q8NC44 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RETREG2Q8NC44 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
RETREG2Q8NC44 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.95
RETREG2Q8NC44 AL449106.1-201ENST00000608517 1980 ntBASIC27.2■■□□□ 1.95
RETREG2Q8NC44 AC091060.1-201ENST00000623524 1766 ntBASIC27.2■■□□□ 1.95
RETREG2Q8NC44 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC27.2■■□□□ 1.95
RETREG2Q8NC44 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC27.2■■□□□ 1.94
RETREG2Q8NC44 MIR4508-201ENST00000584178 70 ntBASIC27.2■■□□□ 1.94
RETREG2Q8NC44 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC27.2■■□□□ 1.94
RETREG2Q8NC44 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC27.2■■□□□ 1.94
RETREG2Q8NC44 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RETREG2Q8NC44 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RETREG2Q8NC44 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC27.19■■□□□ 1.94
RETREG2Q8NC44 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
RETREG2Q8NC44 AC131212.1-201ENST00000613771 668 ntBASIC27.18■■□□□ 1.94
RETREG2Q8NC44 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
RETREG2Q8NC44 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RETREG2Q8NC44 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RETREG2Q8NC44 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC27.17■■□□□ 1.94
RETREG2Q8NC44 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RETREG2Q8NC44 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RETREG2Q8NC44 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RETREG2Q8NC44 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC27.16■■□□□ 1.94
RETREG2Q8NC44 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC27.16■■□□□ 1.94
RETREG2Q8NC44 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
RETREG2Q8NC44 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
RETREG2Q8NC44 IDNK-201ENST00000376417 511 ntTSL 5 BASIC27.15■■□□□ 1.94
RETREG2Q8NC44 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RETREG2Q8NC44 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
RETREG2Q8NC44 MTX2-204ENST00000443241 799 ntTSL 3 BASIC27.15■■□□□ 1.94
RETREG2Q8NC44 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RETREG2Q8NC44 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RETREG2Q8NC44 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RETREG2Q8NC44 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
RETREG2Q8NC44 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
RETREG2Q8NC44 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC27.14■■□□□ 1.94
RETREG2Q8NC44 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.94
RETREG2Q8NC44 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
RETREG2Q8NC44 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RETREG2Q8NC44 GUSBP5-201ENST00000418136 578 ntBASIC27.13■■□□□ 1.93
RETREG2Q8NC44 OR2A1-AS1-204ENST00000470435 602 ntBASIC27.13■■□□□ 1.93
RETREG2Q8NC44 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RETREG2Q8NC44 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC27.12■■□□□ 1.93
RETREG2Q8NC44 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC27.12■■□□□ 1.93
RETREG2Q8NC44 MTURN-203ENST00000409688 843 ntTSL 2 BASIC27.12■■□□□ 1.93
RETREG2Q8NC44 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RETREG2Q8NC44 AL031848.2-201ENST00000607670 837 ntBASIC27.12■■□□□ 1.93
RETREG2Q8NC44 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC27.12■■□□□ 1.93
RETREG2Q8NC44 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
RETREG2Q8NC44 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RETREG2Q8NC44 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
RETREG2Q8NC44 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RETREG2Q8NC44 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC27.11■■□□□ 1.93
RETREG2Q8NC44 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RETREG2Q8NC44 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
RETREG2Q8NC44 THA1P-201ENST00000590384 1145 ntBASIC27.11■■□□□ 1.93
RETREG2Q8NC44 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RETREG2Q8NC44 AC145676.1-201ENST00000514988 2004 ntBASIC27.11■■□□□ 1.93
RETREG2Q8NC44 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC27.11■■□□□ 1.93
RETREG2Q8NC44 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RETREG2Q8NC44 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RETREG2Q8NC44 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RETREG2Q8NC44 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
RETREG2Q8NC44 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
RETREG2Q8NC44 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
RETREG2Q8NC44 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC27.09■■□□□ 1.93
RETREG2Q8NC44 AC103724.3-201ENST00000564481 992 ntBASIC27.09■■□□□ 1.93
RETREG2Q8NC44 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC27.09■■□□□ 1.93
RETREG2Q8NC44 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC27.09■■□□□ 1.93
RETREG2Q8NC44 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
RETREG2Q8NC44 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms