Protein–RNA interactions for Protein: Q8N1F7

NUP93, Nuclear pore complex protein Nup93, humanhuman

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93Q8N1F7 AC087393.1-201ENST00000582896 145 ntBASIC25.35■■□□□ 1.65
NUP93Q8N1F7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.35■■□□□ 1.65
NUP93Q8N1F7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NUP93Q8N1F7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NUP93Q8N1F7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NUP93Q8N1F7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NUP93Q8N1F7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.34■■□□□ 1.65
NUP93Q8N1F7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
NUP93Q8N1F7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
NUP93Q8N1F7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.34■■□□□ 1.65
NUP93Q8N1F7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NUP93Q8N1F7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NUP93Q8N1F7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.33■■□□□ 1.65
NUP93Q8N1F7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.33■■□□□ 1.65
NUP93Q8N1F7 RARRES2P1-201ENST00000474487 481 ntBASIC25.33■■□□□ 1.65
NUP93Q8N1F7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
NUP93Q8N1F7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.64
NUP93Q8N1F7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.64
NUP93Q8N1F7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
NUP93Q8N1F7 AL121749.1-202ENST00000609313 2153 ntBASIC25.32■■□□□ 1.64
NUP93Q8N1F7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NUP93Q8N1F7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.32■■□□□ 1.64
NUP93Q8N1F7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
NUP93Q8N1F7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.32■■□□□ 1.64
NUP93Q8N1F7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
NUP93Q8N1F7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.31■■□□□ 1.64
NUP93Q8N1F7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
NUP93Q8N1F7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.31■■□□□ 1.64
NUP93Q8N1F7 PVT1_1.1-201ENST00000615125 194 ntBASIC25.31■■□□□ 1.64
NUP93Q8N1F7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NUP93Q8N1F7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
NUP93Q8N1F7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.31■■□□□ 1.64
NUP93Q8N1F7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.31■■□□□ 1.64
NUP93Q8N1F7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
NUP93Q8N1F7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.3■■□□□ 1.64
NUP93Q8N1F7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NUP93Q8N1F7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NUP93Q8N1F7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.3■■□□□ 1.64
NUP93Q8N1F7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
NUP93Q8N1F7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NUP93Q8N1F7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NUP93Q8N1F7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NUP93Q8N1F7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
NUP93Q8N1F7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NUP93Q8N1F7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.28■■□□□ 1.64
NUP93Q8N1F7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.28■■□□□ 1.64
NUP93Q8N1F7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NUP93Q8N1F7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.27■■□□□ 1.64
NUP93Q8N1F7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.27■■□□□ 1.64
NUP93Q8N1F7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NUP93Q8N1F7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
NUP93Q8N1F7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NUP93Q8N1F7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
NUP93Q8N1F7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.26■■□□□ 1.63
NUP93Q8N1F7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NUP93Q8N1F7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NUP93Q8N1F7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
NUP93Q8N1F7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NUP93Q8N1F7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NUP93Q8N1F7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.25■■□□□ 1.63
NUP93Q8N1F7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
NUP93Q8N1F7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.25■■□□□ 1.63
NUP93Q8N1F7 AC019171.1-201ENST00000601251 1056 ntBASIC25.25■■□□□ 1.63
NUP93Q8N1F7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NUP93Q8N1F7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
NUP93Q8N1F7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
NUP93Q8N1F7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.25■■□□□ 1.63
NUP93Q8N1F7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
NUP93Q8N1F7 KRT8P33-201ENST00000508125 1423 ntBASIC25.24■■□□□ 1.63
NUP93Q8N1F7 LONRF2P2-201ENST00000439212 571 ntBASIC25.24■■□□□ 1.63
NUP93Q8N1F7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
NUP93Q8N1F7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
NUP93Q8N1F7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.24■■□□□ 1.63
NUP93Q8N1F7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
NUP93Q8N1F7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
NUP93Q8N1F7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
NUP93Q8N1F7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
NUP93Q8N1F7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
NUP93Q8N1F7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
NUP93Q8N1F7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NUP93Q8N1F7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
NUP93Q8N1F7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.22■■□□□ 1.63
NUP93Q8N1F7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.22■■□□□ 1.63
NUP93Q8N1F7 AC103834.1-201ENST00000520383 144 ntBASIC25.22■■□□□ 1.63
NUP93Q8N1F7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.22■■□□□ 1.63
NUP93Q8N1F7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.22■■□□□ 1.63
NUP93Q8N1F7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.22■■□□□ 1.63
NUP93Q8N1F7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
NUP93Q8N1F7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.22■■□□□ 1.63
NUP93Q8N1F7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
NUP93Q8N1F7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NUP93Q8N1F7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.21■■□□□ 1.63
NUP93Q8N1F7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
NUP93Q8N1F7 AC135731.1-201ENST00000569415 2548 ntBASIC25.21■■□□□ 1.63
NUP93Q8N1F7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
NUP93Q8N1F7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.63
NUP93Q8N1F7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
NUP93Q8N1F7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
NUP93Q8N1F7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
NUP93Q8N1F7 YBX1P4-201ENST00000392794 808 ntBASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms