Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CRLF3Q8IUI8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.81■■□□□ 1.4
CRLF3Q8IUI8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.8■■□□□ 1.4
CRLF3Q8IUI8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CRLF3Q8IUI8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CRLF3Q8IUI8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
CRLF3Q8IUI8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CRLF3Q8IUI8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CRLF3Q8IUI8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CRLF3Q8IUI8 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CRLF3Q8IUI8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CRLF3Q8IUI8 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CRLF3Q8IUI8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CRLF3Q8IUI8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.79■■□□□ 1.4
CRLF3Q8IUI8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.79■■□□□ 1.4
CRLF3Q8IUI8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CRLF3Q8IUI8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CRLF3Q8IUI8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CRLF3Q8IUI8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
CRLF3Q8IUI8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CRLF3Q8IUI8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CRLF3Q8IUI8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.78■■□□□ 1.4
CRLF3Q8IUI8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CRLF3Q8IUI8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CRLF3Q8IUI8 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CRLF3Q8IUI8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CRLF3Q8IUI8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.77■■□□□ 1.4
CRLF3Q8IUI8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.77■■□□□ 1.4
CRLF3Q8IUI8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.77■■□□□ 1.4
CRLF3Q8IUI8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CRLF3Q8IUI8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.77■■□□□ 1.4
CRLF3Q8IUI8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.77■■□□□ 1.4
CRLF3Q8IUI8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.77■■□□□ 1.4
CRLF3Q8IUI8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CRLF3Q8IUI8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.76■■□□□ 1.39
CRLF3Q8IUI8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.76■■□□□ 1.39
CRLF3Q8IUI8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
CRLF3Q8IUI8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CRLF3Q8IUI8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.76■■□□□ 1.39
CRLF3Q8IUI8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CRLF3Q8IUI8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CRLF3Q8IUI8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CRLF3Q8IUI8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.75■■□□□ 1.39
CRLF3Q8IUI8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CRLF3Q8IUI8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
CRLF3Q8IUI8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CRLF3Q8IUI8 AC096887.2-201ENST00000623443 1957 ntBASIC23.74■■□□□ 1.39
CRLF3Q8IUI8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CRLF3Q8IUI8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CRLF3Q8IUI8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.74■■□□□ 1.39
CRLF3Q8IUI8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CRLF3Q8IUI8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CRLF3Q8IUI8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CRLF3Q8IUI8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CRLF3Q8IUI8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
CRLF3Q8IUI8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.73■■□□□ 1.39
CRLF3Q8IUI8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CRLF3Q8IUI8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.73■■□□□ 1.39
CRLF3Q8IUI8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.73■■□□□ 1.39
CRLF3Q8IUI8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CRLF3Q8IUI8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CRLF3Q8IUI8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CRLF3Q8IUI8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CRLF3Q8IUI8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CRLF3Q8IUI8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CRLF3Q8IUI8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.72■■□□□ 1.39
CRLF3Q8IUI8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CRLF3Q8IUI8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CRLF3Q8IUI8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CRLF3Q8IUI8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CRLF3Q8IUI8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CRLF3Q8IUI8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CRLF3Q8IUI8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CRLF3Q8IUI8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CRLF3Q8IUI8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.71■■□□□ 1.39
CRLF3Q8IUI8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CRLF3Q8IUI8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CRLF3Q8IUI8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
CRLF3Q8IUI8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.7■■□□□ 1.38
CRLF3Q8IUI8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CRLF3Q8IUI8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.7■■□□□ 1.38
CRLF3Q8IUI8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.7■■□□□ 1.38
CRLF3Q8IUI8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CRLF3Q8IUI8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
CRLF3Q8IUI8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CRLF3Q8IUI8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.7■■□□□ 1.38
CRLF3Q8IUI8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CRLF3Q8IUI8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CRLF3Q8IUI8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.69■■□□□ 1.38
CRLF3Q8IUI8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CRLF3Q8IUI8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.68■■□□□ 1.38
CRLF3Q8IUI8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.68■■□□□ 1.38
CRLF3Q8IUI8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
CRLF3Q8IUI8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CRLF3Q8IUI8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CRLF3Q8IUI8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CRLF3Q8IUI8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CRLF3Q8IUI8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.67■■□□□ 1.38
CRLF3Q8IUI8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CRLF3Q8IUI8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms