Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
COPS6Q7L5N1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC30.68■■■□□ 2.5
COPS6Q7L5N1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC30.68■■■□□ 2.5
COPS6Q7L5N1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
COPS6Q7L5N1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
COPS6Q7L5N1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
COPS6Q7L5N1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC30.68■■■□□ 2.5
COPS6Q7L5N1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
COPS6Q7L5N1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
COPS6Q7L5N1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC30.67■■■□□ 2.5
COPS6Q7L5N1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC30.67■■■□□ 2.5
COPS6Q7L5N1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
COPS6Q7L5N1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC30.67■■■□□ 2.5
COPS6Q7L5N1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
COPS6Q7L5N1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
COPS6Q7L5N1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
COPS6Q7L5N1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
COPS6Q7L5N1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC30.66■■■□□ 2.5
COPS6Q7L5N1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC30.66■■■□□ 2.5
COPS6Q7L5N1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC30.66■■■□□ 2.5
COPS6Q7L5N1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC30.66■■■□□ 2.5
COPS6Q7L5N1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
COPS6Q7L5N1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
COPS6Q7L5N1 KRT18P10-201ENST00000388836 1287 ntBASIC30.65■■■□□ 2.5
COPS6Q7L5N1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
COPS6Q7L5N1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC30.64■■■□□ 2.5
COPS6Q7L5N1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
COPS6Q7L5N1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC30.64■■■□□ 2.5
COPS6Q7L5N1 AL031848.2-201ENST00000607670 837 ntBASIC30.64■■■□□ 2.5
COPS6Q7L5N1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
COPS6Q7L5N1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
COPS6Q7L5N1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
COPS6Q7L5N1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC30.63■■■□□ 2.49
COPS6Q7L5N1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
COPS6Q7L5N1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
COPS6Q7L5N1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC30.62■■■□□ 2.49
COPS6Q7L5N1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
COPS6Q7L5N1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
COPS6Q7L5N1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
COPS6Q7L5N1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
COPS6Q7L5N1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
COPS6Q7L5N1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
COPS6Q7L5N1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
COPS6Q7L5N1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
COPS6Q7L5N1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC30.59■■■□□ 2.49
COPS6Q7L5N1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
COPS6Q7L5N1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC30.59■■■□□ 2.49
COPS6Q7L5N1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
COPS6Q7L5N1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
COPS6Q7L5N1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
COPS6Q7L5N1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
COPS6Q7L5N1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
COPS6Q7L5N1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
COPS6Q7L5N1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC30.57■■■□□ 2.49
COPS6Q7L5N1 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
COPS6Q7L5N1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
COPS6Q7L5N1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
COPS6Q7L5N1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
COPS6Q7L5N1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC30.57■■■□□ 2.48
COPS6Q7L5N1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
COPS6Q7L5N1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC30.56■■■□□ 2.48
COPS6Q7L5N1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
COPS6Q7L5N1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC30.56■■■□□ 2.48
COPS6Q7L5N1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC30.56■■■□□ 2.48
COPS6Q7L5N1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
COPS6Q7L5N1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
COPS6Q7L5N1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
COPS6Q7L5N1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
COPS6Q7L5N1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
COPS6Q7L5N1 HES6-204ENST00000409182 863 ntTSL 2 BASIC30.54■■■□□ 2.48
COPS6Q7L5N1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
COPS6Q7L5N1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
COPS6Q7L5N1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
COPS6Q7L5N1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
COPS6Q7L5N1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
COPS6Q7L5N1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
COPS6Q7L5N1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC30.54■■■□□ 2.48
COPS6Q7L5N1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
COPS6Q7L5N1 OR2A1-AS1-204ENST00000470435 602 ntBASIC30.53■■■□□ 2.48
COPS6Q7L5N1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
COPS6Q7L5N1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
COPS6Q7L5N1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
COPS6Q7L5N1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC30.52■■■□□ 2.48
COPS6Q7L5N1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
COPS6Q7L5N1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
COPS6Q7L5N1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC30.52■■■□□ 2.48
COPS6Q7L5N1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
COPS6Q7L5N1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
COPS6Q7L5N1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC30.51■■■□□ 2.48
COPS6Q7L5N1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.48
COPS6Q7L5N1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
COPS6Q7L5N1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
COPS6Q7L5N1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
COPS6Q7L5N1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
COPS6Q7L5N1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC30.5■■■□□ 2.47
COPS6Q7L5N1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC30.5■■■□□ 2.47
COPS6Q7L5N1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC30.5■■■□□ 2.47
COPS6Q7L5N1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
COPS6Q7L5N1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
COPS6Q7L5N1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC30.49■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms