Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 GCOM1-205ENST00000468886 2508 ntTSL 1 (best)13.87□□□□□ -0.195e-6■■■■■ 28.2
LSM11P83369 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.345e-6■■■■■ 28.2
LSM11P83369 GCOM1-203ENST00000460962 3156 ntTSL 211.43□□□□□ -0.585e-6■■■■■ 28.2
LSM11P83369 GCOM1-207ENST00000477282 1536 ntTSL 29.32□□□□□ -0.925e-6■■■■■ 28.2
LSM11P83369 MYZAP-203ENST00000461709 738 ntTSL 38.07□□□□□ -1.125e-6■■■■■ 28.2
LSM11P83369 EIF4A1-219ENST00000581770 447 ntTSL 212.19□□□□□ -0.462e-7■■■■■ 28.2
LSM11P83369 KAT2A-203ENST00000586972 852 ntTSL 217.74■□□□□ 0.432e-9■■■■■ 28.2
LSM11P83369 ZC3H3-201ENST00000262577 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.641e-6■■■■■ 28.2
LSM11P83369 COL7A1-210ENST00000487017 5807 ntTSL 514.57□□□□□ -0.081e-6■■■■■ 28.2
LSM11P83369 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.351e-6■■■■■ 28.2
LSM11P83369 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.955e-7■■■■■ 28.1
LSM11P83369 FBRSL1-204ENST00000539264 409 ntTSL 220.89■□□□□ 0.935e-7■■■■■ 28.1
LSM11P83369 FBRSL1-207ENST00000543360 238 ntTSL 220.88■□□□□ 0.935e-7■■■■■ 28.1
LSM11P83369 TAOK2-206ENST00000570844 1721 ntTSL 218.67■□□□□ 0.586e-8■■■■■ 28.1
LSM11P83369 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.73■□□□□ 0.116e-8■■■■■ 28.1
LSM11P83369 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.216e-8■■■■■ 28.1
LSM11P83369 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.42□□□□□ -0.266e-8■■■■■ 28.1
LSM11P83369 FUK-203ENST00000464499 4439 ntTSL 212.41□□□□□ -0.426e-8■■■■■ 28.1
LSM11P83369 FUK-204ENST00000485034 2651 ntTSL 211.49□□□□□ -0.576e-8■■■■■ 28.1
LSM11P83369 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.391e-6■■■■■ 28
LSM11P83369 MACROD1-208ENST00000545464 899 ntTSL 321.58■■□□□ 1.051e-6■■■■■ 28
LSM11P83369 MACROD1-206ENST00000542359 459 ntTSL 313.49□□□□□ -0.251e-6■■■■■ 28
LSM11P83369 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.84■□□□□ 0.456e-12■■■■■ 28
LSM11P83369 LUC7L2-204ENST00000456182 2411 ntTSL 1 (best)17.11■□□□□ 0.336e-12■■■■■ 28
LSM11P83369 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.186e-12■■■■■ 28
LSM11P83369 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.311e-6■■■■■ 28
LSM11P83369 LUC7L2-209ENST00000608368 551 ntTSL 412.54□□□□□ -0.46e-12■■■■■ 28
LSM11P83369 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC12.13□□□□□ -0.476e-12■■■■■ 28
LSM11P83369 DENND4C-208ENST00000602708 551 ntTSL 411.75□□□□□ -0.531e-6■■■■■ 28
LSM11P83369 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.66e-12■■■■■ 28
LSM11P83369 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC10.93□□□□□ -0.661e-6■■■■■ 28
LSM11P83369 SMYD3-202ENST00000366517 1372 ntTSL 1 (best)10.58□□□□□ -0.725e-7■■■■■ 28
LSM11P83369 SMYD3-217ENST00000493441 823 ntTSL 210.33□□□□□ -0.765e-7■■■■■ 28
LSM11P83369 SMYD3-209ENST00000470510 1042 ntTSL 510.27□□□□□ -0.775e-7■■■■■ 28
LSM11P83369 SRBD1-205ENST00000493649 655 ntTSL 49.56□□□□□ -0.886e-12■■■■■ 28
LSM11P83369 C7orf55-LUC7L2-201ENST00000541515 1661 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.956e-12■■■■■ 28
LSM11P83369 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC8.8□□□□□ -15e-7■■■■■ 28
LSM11P83369 SMYD3-201ENST00000366516 1863 ntTSL 1 (best)8.43□□□□□ -1.065e-7■■■■■ 28
LSM11P83369 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.12□□□□□ -1.116e-12■■■■■ 28
LSM11P83369 LUC7L2-205ENST00000463912 2382 ntTSL 26.35□□□□□ -1.396e-12■■■■■ 28
LSM11P83369 LUC7L2-207ENST00000498518 2837 ntTSL 24.69□□□□□ -1.666e-12■■■■■ 28
LSM11P83369 KIFC2-205ENST00000531425 1053 ntTSL 321.51■■□□□ 1.031e-7■■■■■ 28
LSM11P83369 KIFC2-204ENST00000531423 679 ntTSL 314.02□□□□□ -0.171e-7■■■■■ 28
LSM11P83369 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.34e-8■■■■■ 27.9
LSM11P83369 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.444e-8■■■■■ 27.9
LSM11P83369 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.69■□□□□ 0.746e-12■■■■■ 27.9
LSM11P83369 MIR17HG-203ENST00000582141 2845 ntTSL 1 (best)16.69■□□□□ 0.266e-12■■■■■ 27.9
LSM11P83369 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.563e-9■■■■■ 27.8
LSM11P83369 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.76□□□□□ -1.653e-9■■■■■ 27.8
LSM11P83369 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.65□□□□□ -1.673e-9■■■■■ 27.8
LSM11P83369 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.33□□□□□ -1.723e-9■■■■■ 27.8
LSM11P83369 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.3□□□□□ -1.723e-9■■■■■ 27.8
LSM11P83369 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.723e-9■■■■■ 27.8
LSM11P83369 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.863e-9■■■■■ 27.8
LSM11P83369 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 16e-7■■■■■ 27.8
LSM11P83369 SDF4-205ENST00000465727 2095 ntTSL 218.53■□□□□ 0.566e-7■■■■■ 27.8
LSM11P83369 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.216e-7■■■■■ 27.8
LSM11P83369 SDF4-203ENST00000403997 728 ntTSL 311.49□□□□□ -0.576e-7■■■■■ 27.8
LSM11P83369 GSDMB-215ENST00000524039 1100 ntTSL 26.94□□□□□ -1.33e-9■■■■■ 27.8
LSM11P83369 GSDMB-213ENST00000522564 958 ntTSL 26.41□□□□□ -1.383e-9■■■■■ 27.8
LSM11P83369 GSDMB-214ENST00000523371 1127 ntTSL 26.19□□□□□ -1.423e-9■■■■■ 27.8
LSM11P83369 TEX10-202ENST00000429235 824 ntTSL 512.09□□□□□ -0.474e-17■■■■■ 27.6
LSM11P83369 TEX10-201ENST00000374902 3074 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.814e-17■■■■■ 27.6
LSM11P83369 TEX10-204ENST00000535814 3006 ntTSL 2 BASIC9.42□□□□□ -0.94e-17■■■■■ 27.6
LSM11P83369 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC24.47■■□□□ 1.517e-7■■■■■ 27.6
LSM11P83369 LINC01089-212ENST00000545885 559 ntTSL 28.44□□□□□ -1.067e-7■■■■■ 27.6
LSM11P83369 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.781e-7■■■■■ 27.4
LSM11P83369 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.739e-7■■■■■ 27.4
LSM11P83369 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.251e-7■■■■■ 27.4
LSM11P83369 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.881e-7■■■■■ 27.4
LSM11P83369 ACAP3-210ENST00000478065 2393 ntTSL 318.47■□□□□ 0.553e-7■■■■■ 27.4
LSM11P83369 GAK-209ENST00000507580 468 ntTSL 418.2■□□□□ 0.52e-6■■■■■ 27.4
LSM11P83369 GAK-219ENST00000512325 577 ntTSL 318.2■□□□□ 0.52e-6■■■■■ 27.4
LSM11P83369 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.49e-7■■■■■ 27.4
LSM11P83369 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.41e-7■■■■■ 27.4
LSM11P83369 GAK-202ENST00000502656 554 ntTSL 417.13■□□□□ 0.332e-6■■■■■ 27.4
LSM11P83369 PRKAR1B-206ENST00000417852 651 ntTSL 216.96■□□□□ 0.311e-7■■■■■ 27.4
LSM11P83369 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.8■□□□□ 0.281e-7■■■■■ 27.4
LSM11P83369 CDK16-208ENST00000517426 1574 ntTSL 516.51■□□□□ 0.231e-7■■■■■ 27.4
LSM11P83369 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.191e-7■■■■■ 27.4
LSM11P83369 IRF3-231ENST00000602190 413 ntTSL 316.09■□□□□ 0.171e-7■■■■■ 27.4
LSM11P83369 SLC19A1-208ENST00000468508 1435 ntTSL 215.21■□□□□ 0.031e-7■■■■■ 27.4
LSM11P83369 CSNK1G2-204ENST00000589350 780 ntTSL 514.98□□□□□ -0.011e-7■■■■■ 27.4
LSM11P83369 PRKAR1B-207ENST00000430040 1006 ntTSL 314.9□□□□□ -0.021e-7■■■■■ 27.4
LSM11P83369 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.041e-7■■■■■ 27.4
LSM11P83369 PRKAR1B-205ENST00000414568 752 ntTSL 514.67□□□□□ -0.061e-7■■■■■ 27.4
LSM11P83369 CDK16-206ENST00000462827 664 ntTSL 513.81□□□□□ -0.21e-7■■■■■ 27.4
LSM11P83369 AP001505.2-201ENST00000616815 443 ntBASIC12.56□□□□□ -0.41e-7■■■■■ 27.4
LSM11P83369 CDK16-201ENST00000276052 3016 ntTSL 2 BASIC12.32□□□□□ -0.441e-7■■■■■ 27.4
LSM11P83369 CSNK1G2-210ENST00000614707 249 ntTSL 212.12□□□□□ -0.471e-7■■■■■ 27.4
LSM11P83369 GAK-212ENST00000510022 618 ntTSL 411.91□□□□□ -0.52e-6■■■■■ 27.4
LSM11P83369 CHID1-224ENST00000534254 1019 ntTSL 511.83□□□□□ -0.521e-7■■■■■ 27.4
LSM11P83369 CDK16-204ENST00000457458 3158 ntTSL 1 (best) BASIC11.54□□□□□ -0.561e-7■■■■■ 27.4
LSM11P83369 CHID1-219ENST00000531859 834 ntTSL 511.31□□□□□ -0.61e-7■■■■■ 27.4
LSM11P83369 GAK-215ENST00000511229 568 ntTSL 310.93□□□□□ -0.662e-6■■■■■ 27.4
LSM11P83369 CHID1-207ENST00000524832 878 ntTSL 29.5□□□□□ -0.891e-7■■■■■ 27.4
LSM11P83369 LRP12-202ENST00000424843 4092 ntTSL 2 BASIC10.55□□□□□ -0.724e-27■■■■■ 27.4
LSM11P83369 LRP12-205ENST00000520770 853 ntTSL 1 (best)10.19□□□□□ -0.784e-27■■■■■ 27.4
LSM11P83369 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.294e-27■■■■■ 27.4
LSM11P83369 LRP12-204ENST00000519675 5008 ntTSL 26.24□□□□□ -1.414e-27■■■■■ 27.4
Retrieved 100 of 11,495 protein–RNA pairs in 68.4 ms