RNA–Protein interactions for RNA: ENST00000462827.2

CDK16-206, Transcript of cyclin dependent kinase 16, humanhuman

TSL 5

Gene CDK16, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-206ENST00000462827 AEBP2Q6ZN18 517 aaPredicted RBP32.42■■■□□ 2.78
CDK16-206ENST00000462827 CHIC1Q5VXU3 224 aa30.66■■■□□ 2.5
CDK16-206ENST00000462827 NISCHQ9Y2I1 1504 aa28.1■■■□□ 2.09
CDK16-206ENST00000462827 SENP3Q9H4L4 574 aaPredicted RBP27.6■■■□□ 2.01
CDK16-206ENST00000462827 PHF23Q9BUL5 403 aaPredicted RBP27.28■■□□□ 1.96
CDK16-206ENST00000462827 FOXD1Q16676 465 aa25.78■■□□□ 1.72
CDK16-206ENST00000462827 CCDC180Q9P1Z9 1646 aa25.09■■□□□ 1.61
CDK16-206ENST00000462827 ABCC9O60706 1549 aa24.47■■□□□ 1.51
CDK16-206ENST00000462827 PLPPR3Q6T4P5 718 aa24.43■■□□□ 1.5
CDK16-206ENST00000462827 MSH5O43196 834 aa24.1■■□□□ 1.45
CDK16-206ENST00000462827 PPP6R1Q9UPN7 881 aa24.08■■□□□ 1.45
CDK16-206ENST00000462827 PIAS4Q8N2W9 510 aaPredicted RBP24.05■■□□□ 1.44
CDK16-206ENST00000462827 ADRA2BP18089 450 aa23.99■■□□□ 1.43
CDK16-206ENST00000462827 POTEDQ86YR6 584 aa23.72■■□□□ 1.39
CDK16-206ENST00000462827 RB1CC1Q8TDY2 1594 aa23.65■■□□□ 1.38
CDK16-206ENST00000462827 NACADO15069 1562 aa23.58■■□□□ 1.37
CDK16-206ENST00000462827 DCAF8L2P0C7V8 631 aa23.55■■□□□ 1.36
CDK16-206ENST00000462827 MYO15BQ96JP2 1530 aa23.42■■□□□ 1.34
CDK16-206ENST00000462827 ZCCHC6Q5VYS8 1495 aaKnown RBP23.39■■□□□ 1.34
CDK16-206ENST00000462827 DCAF1Q9Y4B6 1507 aa23.29■■□□□ 1.32
CDK16-206ENST00000462827 UNC13AQ9UPW8 1703 aa23■■□□□ 1.27
CDK16-206ENST00000462827 PABPN1Q86U42 306 aaKnown RBP eCLIP22.82■■□□□ 1.242e-11■■□□□ 14
CDK16-206ENST00000462827 SCRIBQ14160 1630 aa22.82■■□□□ 1.24
CDK16-206ENST00000462827 BICRAQ9NZM4 1560 aa22.76■■□□□ 1.23
CDK16-206ENST00000462827 SHROOM4Q9ULL8 1493 aa22.71■■□□□ 1.23
CDK16-206ENST00000462827 DNAJC5BQ9UF47 199 aa22.31■■□□□ 1.16
CDK16-206ENST00000462827 EIF4G1Q04637 1599 aaKnown RBP22.25■■□□□ 1.15
CDK16-206ENST00000462827 CC2D2AQ9P2K1 1620 aa22.15■■□□□ 1.14
CDK16-206ENST00000462827 MAPK8IP2Q13387 824 aaPredicted RBP22.08■■□□□ 1.13
CDK16-206ENST00000462827 CECR2Q9BXF3 1484 aa22.03■■□□□ 1.12
CDK16-206ENST00000462827 DMRT2Q9Y5R5 561 aa21.89■■□□□ 1.09
CDK16-206ENST00000462827 SCAF1Q9H7N4 1312 aaKnown RBP21.86■■□□□ 1.09
CDK16-206ENST00000462827 BAZ1AQ9NRL2 1556 aaPredicted RBP21.86■■□□□ 1.09
CDK16-206ENST00000462827 SMARCA4P51532 1647 aa21.83■■□□□ 1.08
CDK16-206ENST00000462827 SMARCA2P51531 1590 aa21.76■■□□□ 1.07
CDK16-206ENST00000462827 NCAPD3P42695 1498 aa21.69■■□□□ 1.06
CDK16-206ENST00000462827 ATAD2BQ9ULI0 1458 aa21.68■■□□□ 1.06
CDK16-206ENST00000462827 HMGXB3Q12766 1538 aa21.64■■□□□ 1.05
CDK16-206ENST00000462827 PEG3Q9GZU2 1588 aa21.61■■□□□ 1.05
CDK16-206ENST00000462827 MROH2BQ7Z745 1585 aa21.6■■□□□ 1.05
CDK16-206ENST00000462827 BAZ1BQ9UIG0 1483 aaKnown RBP21.58■■□□□ 1.05
CDK16-206ENST00000462827 PPP4R3CPQ6ZMV5 832 aa21.44■■□□□ 1.02
CDK16-206ENST00000462827 WIZO95785 1651 aa21.4■■□□□ 1.02
CDK16-206ENST00000462827 RSF1Q96T23 1441 aaPredicted RBP21.35■■□□□ 1.01
CDK16-206ENST00000462827 TOP2AP11388 1531 aaKnown RBP21.23■□□□□ 0.99
CDK16-206ENST00000462827 ERCC6Q03468 1493 aa21.21■□□□□ 0.99
CDK16-206ENST00000462827 LAMC3Q9Y6N6 1575 aa21.2■□□□□ 0.98
CDK16-206ENST00000462827 NESP48681 1621 aa21.11■□□□□ 0.97
CDK16-206ENST00000462827 CADPSQ9ULU8 1353 aa21.08■□□□□ 0.96
CDK16-206ENST00000462827 PDS5BQ9NTI5 1447 aa21.07■□□□□ 0.96
CDK16-206ENST00000462827 HOXD11P31277 338 aaPredicted RBP21.04■□□□□ 0.96
CDK16-206ENST00000462827 CNKSR2Q8WXI2 1034 aa21.03■□□□□ 0.96
CDK16-206ENST00000462827 DCAF8L1A6NGE4 600 aa21.02■□□□□ 0.96
CDK16-206ENST00000462827 CUX2O14529 1486 aa20.97■□□□□ 0.95
CDK16-206ENST00000462827 KIF21AQ7Z4S6 1674 aa20.95■□□□□ 0.94
CDK16-206ENST00000462827 CFTRP13569 1480 aa20.93■□□□□ 0.94
CDK16-206ENST00000462827 CCDC88BA6NC98 1476 aa20.92■□□□□ 0.94
CDK16-206ENST00000462827 PRDM2Q13029 1718 aa20.88■□□□□ 0.93
CDK16-206ENST00000462827 THOC2Q8NI27 1593 aaKnown RBP20.86■□□□□ 0.93
CDK16-206ENST00000462827 RNF216Q9NWF9 866 aaPredicted RBP20.86■□□□□ 0.93
CDK16-206ENST00000462827 CEP164Q9UPV0 1460 aa20.86■□□□□ 0.93
CDK16-206ENST00000462827 SUPT5HO00267 1087 aaKnown RBP20.85■□□□□ 0.93
CDK16-206ENST00000462827 FANCD2Q9BXW9 1451 aa20.84■□□□□ 0.93
CDK16-206ENST00000462827 MRC2Q9UBG0 1479 aa20.81■□□□□ 0.92
CDK16-206ENST00000462827 CACNB1Q02641 598 aaPredicted RBP20.77■□□□□ 0.92
CDK16-206ENST00000462827 WDR62O43379 1518 aa20.73■□□□□ 0.91
CDK16-206ENST00000462827 ABCC8Q09428 1581 aa20.61■□□□□ 0.89
CDK16-206ENST00000462827 RNF39Q9H2S5 420 aa20.59■□□□□ 0.89
CDK16-206ENST00000462827 URB2Q14146 1524 aaKnown RBP20.58■□□□□ 0.88
CDK16-206ENST00000462827 NCBP3Q53F19 620 aaKnown RBP20.55■□□□□ 0.88
CDK16-206ENST00000462827 DNMBPQ6XZF7 1577 aa20.51■□□□□ 0.87
CDK16-206ENST00000462827 TOPBP1Q92547 1522 aa20.49■□□□□ 0.87
CDK16-206ENST00000462827 IFT140Q96RY7 1462 aa20.42■□□□□ 0.86
CDK16-206ENST00000462827 NPM3O75607 178 aaKnown RBP20.3■□□□□ 0.84
CDK16-206ENST00000462827 POLA1P09884 1462 aaPredicted RBP20.3■□□□□ 0.84
CDK16-206ENST00000462827 CUX1P39880 1505 aa20.28■□□□□ 0.84
CDK16-206ENST00000462827 FGD5Q6ZNL6 1462 aa20.26■□□□□ 0.83
CDK16-206ENST00000462827 C1QBPQ07021 282 aaKnown RBP20.26■□□□□ 0.83
CDK16-206ENST00000462827 DNAJC5Q9H3Z4 198 aa20.26■□□□□ 0.83
CDK16-206ENST00000462827 SOGA1O94964 1423 aa20.26■□□□□ 0.83
CDK16-206ENST00000462827 TARBP1Q13395 1621 aaKnown RBP20.24■□□□□ 0.83
CDK16-206ENST00000462827 WDR97A6NE52 1622 aa20.23■□□□□ 0.83
CDK16-206ENST00000462827 EIF4G3O43432 1585 aaKnown RBP20.22■□□□□ 0.83
CDK16-206ENST00000462827 WRNQ14191 1432 aaPredicted RBP eCLIP20.22■□□□□ 0.83
CDK16-206ENST00000462827 ZNF608Q9ULD9 1512 aaPredicted RBP20.21■□□□□ 0.83
CDK16-206ENST00000462827 RAD54L2Q9Y4B4 1467 aa20.18■□□□□ 0.82
CDK16-206ENST00000462827 TOP2BQ02880 1626 aa20.17■□□□□ 0.82
CDK16-206ENST00000462827 BIVM-ERCC5R4GMW8 1640 aa20.17■□□□□ 0.82
CDK16-206ENST00000462827 AQRO60306 1485 aaKnown RBP eCLIP20.12■□□□□ 0.81
CDK16-206ENST00000462827 SYNJ1O43426 1573 aa20.1■□□□□ 0.81
CDK16-206ENST00000462827 TDRD9Q8NDG6 1382 aaKnown RBP20.09■□□□□ 0.81
CDK16-206ENST00000462827 OSCARQ8IYS5 282 aa20.09■□□□□ 0.81
CDK16-206ENST00000462827 ABCA10Q8WWZ4 1543 aa20.07■□□□□ 0.8
CDK16-206ENST00000462827 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.06■□□□□ 0.8
CDK16-206ENST00000462827 GRIN2BQ13224 1484 aa20.05■□□□□ 0.8
CDK16-206ENST00000462827 GAPVD1Q14C86 1478 aa20.03■□□□□ 0.8
CDK16-206ENST00000462827 PBRM1Q86U86 1689 aa20.02■□□□□ 0.8
CDK16-206ENST00000462827 MAGI1Q96QZ7 1491 aaPredicted RBP20.01■□□□□ 0.79
CDK16-206ENST00000462827 ABCA5Q8WWZ7 1642 aa19.99■□□□□ 0.79
CDK16-206ENST00000462827 FBLN2P98095 1184 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms