RNA–Protein interactions for RNA: ENST00000460962.5

GCOM1-203, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 3,156 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-203ENST00000460962 NISCHQ9Y2I1 1504 aa24.56■■□□□ 1.52
GCOM1-203ENST00000460962 SHROOM4Q9ULL8 1493 aa21.11■□□□□ 0.97
GCOM1-203ENST00000460962 ZCCHC6Q5VYS8 1495 aaKnown RBP20.81■□□□□ 0.92
GCOM1-203ENST00000460962 SUPT5HO00267 1087 aaKnown RBP20.8■□□□□ 0.92
GCOM1-203ENST00000460962 CCDC180Q9P1Z9 1646 aa20.79■□□□□ 0.92
GCOM1-203ENST00000460962 DCAF8L2P0C7V8 631 aa20.38■□□□□ 0.85
GCOM1-203ENST00000460962 CHIC1Q5VXU3 224 aa20.28■□□□□ 0.84
GCOM1-203ENST00000460962 MYO15BQ96JP2 1530 aa20.23■□□□□ 0.83
GCOM1-203ENST00000460962 DCAF1Q9Y4B6 1507 aa20.14■□□□□ 0.81
GCOM1-203ENST00000460962 HRCP23327 699 aa19.98■□□□□ 0.79
GCOM1-203ENST00000460962 PCGF6Q9BYE7 350 aa19.87■□□□□ 0.77
GCOM1-203ENST00000460962 LOC105371045A0A1W2PR82 267 aa19.69■□□□□ 0.74
GCOM1-203ENST00000460962 ABCC9O60706 1549 aa19.68■□□□□ 0.74
GCOM1-203ENST00000460962 SCRIBQ14160 1630 aa19.54■□□□□ 0.72
GCOM1-203ENST00000460962 PPARGC1BQ86YN6 1023 aaKnown RBP19.52■□□□□ 0.71
GCOM1-203ENST00000460962 RSF1Q96T23 1441 aaPredicted RBP19.51■□□□□ 0.71
GCOM1-203ENST00000460962 TRIM26Q12899 539 aaPredicted RBP19.45■□□□□ 0.7
GCOM1-203ENST00000460962 TRIM41Q8WV44 630 aa19.36■□□□□ 0.69
GCOM1-203ENST00000460962 RB1CC1Q8TDY2 1594 aa19.34■□□□□ 0.69
GCOM1-203ENST00000460962 FAM9AQ8IZU1 332 aaPredicted RBP19.21■□□□□ 0.67
GCOM1-203ENST00000460962 NACADO15069 1562 aa19.19■□□□□ 0.66
GCOM1-203ENST00000460962 CECR2Q9BXF3 1484 aa19.14■□□□□ 0.65
GCOM1-203ENST00000460962 ZEB1P37275 1124 aaPredicted RBP19.13■□□□□ 0.65
GCOM1-203ENST00000460962 MROH2BQ7Z745 1585 aa19.1■□□□□ 0.65
GCOM1-203ENST00000460962 EHMT2Q96KQ7 1210 aa19.05■□□□□ 0.64
GCOM1-203ENST00000460962 WIZO95785 1651 aa19.01■□□□□ 0.63
GCOM1-203ENST00000460962 BAZ1AQ9NRL2 1556 aaPredicted RBP18.91■□□□□ 0.62
GCOM1-203ENST00000460962 EIF4G1Q04637 1599 aaKnown RBP18.81■□□□□ 0.6
GCOM1-203ENST00000460962 TOP2AP11388 1531 aaKnown RBP18.72■□□□□ 0.59
GCOM1-203ENST00000460962 SMARCA4P51532 1647 aa18.67■□□□□ 0.58
GCOM1-203ENST00000460962 ABCC8Q09428 1581 aa18.66■□□□□ 0.58
GCOM1-203ENST00000460962 CCDC88BA6NC98 1476 aa18.65■□□□□ 0.58
GCOM1-203ENST00000460962 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.63■□□□□ 0.57
GCOM1-203ENST00000460962 CCER1Q8TC90 406 aaPredicted RBP18.62■□□□□ 0.57
GCOM1-203ENST00000460962 SMARCA2P51531 1590 aa18.62■□□□□ 0.57
GCOM1-203ENST00000460962 WRNQ14191 1432 aaPredicted RBP eCLIP18.56■□□□□ 0.56
GCOM1-203ENST00000460962 CEP162Q5TB80 1403 aa18.55■□□□□ 0.56
GCOM1-203ENST00000460962 UNC13AQ9UPW8 1703 aa18.54■□□□□ 0.56
GCOM1-203ENST00000460962 SOGA1O94964 1423 aa18.52■□□□□ 0.56
GCOM1-203ENST00000460962 SCAF1Q9H7N4 1312 aaKnown RBP18.51■□□□□ 0.55
GCOM1-203ENST00000460962 TNIKQ9UKE5 1360 aa18.5■□□□□ 0.55
GCOM1-203ENST00000460962 TTBK1Q5TCY1 1321 aaPredicted RBP18.49■□□□□ 0.55
GCOM1-203ENST00000460962 EEA1Q15075 1411 aa18.49■□□□□ 0.55
GCOM1-203ENST00000460962 CSRNP3Q8WYN3 585 aa18.46■□□□□ 0.55
GCOM1-203ENST00000460962 UBTFP17480 764 aaKnown RBP18.44■□□□□ 0.54
GCOM1-203ENST00000460962 RUSC2Q8N2Y8 1516 aa18.41■□□□□ 0.54
GCOM1-203ENST00000460962 PELP1Q8IZL8 1130 aaKnown RBP18.4■□□□□ 0.54
GCOM1-203ENST00000460962 GOLGA3Q08378 1498 aa18.37■□□□□ 0.53
GCOM1-203ENST00000460962 PABPN1Q86U42 306 aaKnown RBP eCLIP18.34■□□□□ 0.53
GCOM1-203ENST00000460962 DIEXFQ68CQ4 756 aaKnown RBP18.34■□□□□ 0.53
GCOM1-203ENST00000460962 ACIN1Q9UKV3 1341 aaKnown RBP18.3■□□□□ 0.52
GCOM1-203ENST00000460962 BICRAQ9NZM4 1560 aa18.3■□□□□ 0.52
GCOM1-203ENST00000460962 PEG3Q9GZU2 1588 aa18.29■□□□□ 0.52
GCOM1-203ENST00000460962 CEP164Q9UPV0 1460 aa18.25■□□□□ 0.51
GCOM1-203ENST00000460962 NEUROD1Q13562 356 aa18.24■□□□□ 0.51
GCOM1-203ENST00000460962 SYNJ1O43426 1573 aa18.22■□□□□ 0.51
GCOM1-203ENST00000460962 CENPBP07199 599 aaPredicted RBP18.22■□□□□ 0.51
GCOM1-203ENST00000460962 KIF21BO75037 1637 aa18.21■□□□□ 0.5
GCOM1-203ENST00000460962 CLIP1P30622 1438 aa18.17■□□□□ 0.5
GCOM1-203ENST00000460962 ZNF316A6NFI3 1004 aaPredicted RBP18.16■□□□□ 0.5
GCOM1-203ENST00000460962 ATAD2BQ9ULI0 1458 aa18.15■□□□□ 0.5
GCOM1-203ENST00000460962 BAZ1BQ9UIG0 1483 aaKnown RBP18.13■□□□□ 0.49
GCOM1-203ENST00000460962 HNRNPUL2Q1KMD3 747 aaKnown RBP18.12■□□□□ 0.49
GCOM1-203ENST00000460962 VPS8Q8N3P4 1428 aa18.11■□□□□ 0.49
GCOM1-203ENST00000460962 APLP2Q06481 763 aa18.1■□□□□ 0.49
GCOM1-203ENST00000460962 GTF3C3Q9Y5Q9 886 aa18.1■□□□□ 0.49
GCOM1-203ENST00000460962 RAPGEF2Q9Y4G8 1499 aa18.07■□□□□ 0.48
GCOM1-203ENST00000460962 RANGAP1P46060 587 aaPredicted RBP18.01■□□□□ 0.47
GCOM1-203ENST00000460962 TOP2BQ02880 1626 aa17.99■□□□□ 0.47
GCOM1-203ENST00000460962 YTHDC1Q96MU7 727 aaKnown RBP17.93■□□□□ 0.46
GCOM1-203ENST00000460962 BIVM-ERCC5R4GMW8 1640 aa17.91■□□□□ 0.46
GCOM1-203ENST00000460962 MIER1Q8N108 512 aa17.9■□□□□ 0.46
GCOM1-203ENST00000460962 ERICH3Q5RHP9 1530 aa17.89■□□□□ 0.45
GCOM1-203ENST00000460962 PRXQ9BXM0 1461 aa17.86■□□□□ 0.45
GCOM1-203ENST00000460962 ARAP1Q96P48 1450 aa17.82■□□□□ 0.44
GCOM1-203ENST00000460962 CLSPNQ9HAW4 1339 aa17.81■□□□□ 0.44
GCOM1-203ENST00000460962 HMGXB3Q12766 1538 aa17.77■□□□□ 0.44
GCOM1-203ENST00000460962 KIF27Q86VH2 1401 aa17.77■□□□□ 0.44
GCOM1-203ENST00000460962 DHX57Q6P158 1386 aaKnown RBP17.77■□□□□ 0.44
GCOM1-203ENST00000460962 CUX1P39880 1505 aa17.77■□□□□ 0.43
GCOM1-203ENST00000460962 KANK4Q5T7N3 995 aaPredicted RBP17.77■□□□□ 0.43
GCOM1-203ENST00000460962 NCAPD3P42695 1498 aa17.76■□□□□ 0.43
GCOM1-203ENST00000460962 RRBP1Q9P2E9 1410 aaKnown RBP17.7■□□□□ 0.42
GCOM1-203ENST00000460962 CFTRP13569 1480 aa17.67■□□□□ 0.42
GCOM1-203ENST00000460962 ARHGAP35Q9NRY4 1499 aa17.65■□□□□ 0.42
GCOM1-203ENST00000460962 CCNB3Q8WWL7 1395 aa17.64■□□□□ 0.41
GCOM1-203ENST00000460962 CUX2O14529 1486 aa17.61■□□□□ 0.41
GCOM1-203ENST00000460962 ITGAEP38570 1179 aa17.59■□□□□ 0.41
GCOM1-203ENST00000460962 IGF1RP08069 1367 aa17.53■□□□□ 0.4
GCOM1-203ENST00000460962 PRDM2Q13029 1718 aa17.52■□□□□ 0.4
GCOM1-203ENST00000460962 MYT1Q01538 1121 aa17.51■□□□□ 0.39
GCOM1-203ENST00000460962 RAB3GAP2Q9H2M9 1393 aa17.5■□□□□ 0.39
GCOM1-203ENST00000460962 TIAM1Q13009 1591 aa17.5■□□□□ 0.39
GCOM1-203ENST00000460962 CARMIL1Q5VZK9 1371 aa17.48■□□□□ 0.39
GCOM1-203ENST00000460962 MAP3K1Q13233 1512 aa17.48■□□□□ 0.39
GCOM1-203ENST00000460962 CADPSQ9ULU8 1353 aa17.45■□□□□ 0.38
GCOM1-203ENST00000460962 FGD5Q6ZNL6 1462 aa17.44■□□□□ 0.38
GCOM1-203ENST00000460962 LRRC9Q6ZRR7 1453 aa17.44■□□□□ 0.38
GCOM1-203ENST00000460962 MAPKBP1O60336 1514 aa17.43■□□□□ 0.38
GCOM1-203ENST00000460962 SETD5Q9C0A6 1442 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms