RNA–Protein interactions for RNA: ENST00000477282.5

GCOM1-207, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 1,536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-207ENST00000477282 AEBP2Q6ZN18 517 aaPredicted RBP21.39■■□□□ 1.01
GCOM1-207ENST00000477282 CHIC1Q5VXU3 224 aa20.81■□□□□ 0.92
GCOM1-207ENST00000477282 SENP3Q9H4L4 574 aaPredicted RBP18.3■□□□□ 0.52
GCOM1-207ENST00000477282 PHF23Q9BUL5 403 aaPredicted RBP18.21■□□□□ 0.51
GCOM1-207ENST00000477282 FOXD1Q16676 465 aa16.91■□□□□ 0.3
GCOM1-207ENST00000477282 PLPPR3Q6T4P5 718 aa16.87■□□□□ 0.29
GCOM1-207ENST00000477282 ADRA2BP18089 450 aa16.11■□□□□ 0.17
GCOM1-207ENST00000477282 PPP6R1Q9UPN7 881 aa16.11■□□□□ 0.17
GCOM1-207ENST00000477282 PIAS4Q8N2W9 510 aaPredicted RBP15.96■□□□□ 0.15
GCOM1-207ENST00000477282 MSH5O43196 834 aa15.77■□□□□ 0.11
GCOM1-207ENST00000477282 SCAF1Q9H7N4 1312 aaKnown RBP14.88□□□□□ -0.03
GCOM1-207ENST00000477282 PPP4R3CPQ6ZMV5 832 aa14.81□□□□□ -0.04
GCOM1-207ENST00000477282 MAPK8IP2Q13387 824 aaPredicted RBP14.64□□□□□ -0.07
GCOM1-207ENST00000477282 POTEDQ86YR6 584 aa14.56□□□□□ -0.08
GCOM1-207ENST00000477282 DMRT2Q9Y5R5 561 aa14.56□□□□□ -0.08
GCOM1-207ENST00000477282 NCBP3Q53F19 620 aaKnown RBP14.46□□□□□ -0.09
GCOM1-207ENST00000477282 CNKSR2Q8WXI2 1034 aa14.46□□□□□ -0.09
GCOM1-207ENST00000477282 KCNA4P22459 653 aa14.24□□□□□ -0.13
GCOM1-207ENST00000477282 RNF216Q9NWF9 866 aaPredicted RBP14.22□□□□□ -0.13
GCOM1-207ENST00000477282 HOXD11P31277 338 aaPredicted RBP14.19□□□□□ -0.14
GCOM1-207ENST00000477282 NPM3O75607 178 aaKnown RBP14.15□□□□□ -0.14
GCOM1-207ENST00000477282 NISCHQ9Y2I1 1504 aa13.99□□□□□ -0.17
GCOM1-207ENST00000477282 DCAF8L1A6NGE4 600 aa13.94□□□□□ -0.18
GCOM1-207ENST00000477282 DNAJC5BQ9UF47 199 aa13.82□□□□□ -0.2
GCOM1-207ENST00000477282 SLC4A1APQ9BWU0 796 aaKnown RBP13.59□□□□□ -0.23
GCOM1-207ENST00000477282 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.55□□□□□ -0.24
GCOM1-207ENST00000477282 RNF39Q9H2S5 420 aa13.44□□□□□ -0.26
GCOM1-207ENST00000477282 SLC4A2P04920 1241 aa13.36□□□□□ -0.27
GCOM1-207ENST00000477282 C1QBPQ07021 282 aaKnown RBP13.32□□□□□ -0.28
GCOM1-207ENST00000477282 U3KPZ7 1027 aaPredicted RBP13.24□□□□□ -0.29
GCOM1-207ENST00000477282 CACNB1Q02641 598 aaPredicted RBP13.23□□□□□ -0.29
GCOM1-207ENST00000477282 FOXD4L1Q9NU39 408 aa13.22□□□□□ -0.29
GCOM1-207ENST00000477282 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.16□□□□□ -0.3
GCOM1-207ENST00000477282 HNRNPUL2Q1KMD3 747 aaKnown RBP13.16□□□□□ -0.3
GCOM1-207ENST00000477282 MYCNP04198 464 aaPredicted RBP13.14□□□□□ -0.31
GCOM1-207ENST00000477282 APLP2Q06481 763 aa13.09□□□□□ -0.31
GCOM1-207ENST00000477282 SAMD1Q6SPF0 538 aaPredicted RBP13.08□□□□□ -0.32
GCOM1-207ENST00000477282 ZBTB22O15209 634 aa13.06□□□□□ -0.32
GCOM1-207ENST00000477282 EHMT2Q96KQ7 1210 aa12.97□□□□□ -0.33
GCOM1-207ENST00000477282 CAPN15O75808 1086 aa12.93□□□□□ -0.34
GCOM1-207ENST00000477282 SPINK5Q9NQ38 1064 aaPredicted RBP12.9□□□□□ -0.34
GCOM1-207ENST00000477282 CSRNP3Q8WYN3 585 aa12.88□□□□□ -0.35
GCOM1-207ENST00000477282 ZNF219Q9P2Y4 722 aaPredicted RBP12.87□□□□□ -0.35
GCOM1-207ENST00000477282 ATXN8OSP0DMR3 200 aa12.82□□□□□ -0.36
GCOM1-207ENST00000477282 TRHP20396 242 aaPredicted RBP12.82□□□□□ -0.36
GCOM1-207ENST00000477282 DSG3P32926 999 aa12.72□□□□□ -0.37
GCOM1-207ENST00000477282 ATF5Q9Y2D1 282 aaPredicted RBP12.67□□□□□ -0.38
GCOM1-207ENST00000477282 ABCB7O75027 752 aa12.62□□□□□ -0.39
GCOM1-207ENST00000477282 POLA2Q14181 598 aa12.56□□□□□ -0.4
GCOM1-207ENST00000477282 ZBTB12Q9Y330 459 aaPredicted RBP12.45□□□□□ -0.42
GCOM1-207ENST00000477282 CCDC180Q9P1Z9 1646 aa12.44□□□□□ -0.42
GCOM1-207ENST00000477282 ABCC9O60706 1549 aa12.41□□□□□ -0.42
GCOM1-207ENST00000477282 SLC24A1O60721 1099 aa12.37□□□□□ -0.43
GCOM1-207ENST00000477282 FBLN2P98095 1184 aa12.31□□□□□ -0.44
GCOM1-207ENST00000477282 RBM42Q9BTD8 480 aaKnown RBP12.22□□□□□ -0.45
GCOM1-207ENST00000477282 MKRN4PQ13434 485 aaPredicted RBP12.14□□□□□ -0.47
GCOM1-207ENST00000477282 OSCARQ8IYS5 282 aa12.13□□□□□ -0.47
GCOM1-207ENST00000477282 SPDYE2BA6NHP3 402 aa12.06□□□□□ -0.48
GCOM1-207ENST00000477282 SPDYE6P0CI01 402 aa12.06□□□□□ -0.48
GCOM1-207ENST00000477282 SPDYE2Q495Y8 402 aa12.06□□□□□ -0.48
GCOM1-207ENST00000477282 AKT1S1Q96B36 256 aa12□□□□□ -0.49
GCOM1-207ENST00000477282 ZNF692Q9BU19 519 aaPredicted RBP11.95□□□□□ -0.5
GCOM1-207ENST00000477282 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.5
GCOM1-207ENST00000477282 DCAF8L2P0C7V8 631 aa11.88□□□□□ -0.51
GCOM1-207ENST00000477282 SPDYE4A6NLX3 237 aa11.86□□□□□ -0.51
GCOM1-207ENST00000477282 REM2Q8IYK8 340 aaPredicted RBP11.84□□□□□ -0.51
GCOM1-207ENST00000477282 RB1CC1Q8TDY2 1594 aa11.82□□□□□ -0.52
GCOM1-207ENST00000477282 PABPN1Q86U42 306 aaKnown RBP eCLIP11.77□□□□□ -0.52
GCOM1-207ENST00000477282 NACADO15069 1562 aa11.77□□□□□ -0.53
GCOM1-207ENST00000477282 SPDYE1Q8NFV5 336 aaPredicted RBP11.75□□□□□ -0.53
GCOM1-207ENST00000477282 CHRDL2Q6WN34 429 aa11.71□□□□□ -0.53
GCOM1-207ENST00000477282 PITPNM1O00562 1244 aa11.7□□□□□ -0.54
GCOM1-207ENST00000477282 FKBP8Q14318 412 aa11.7□□□□□ -0.54
GCOM1-207ENST00000477282 CLEC11AQ9Y240 323 aa11.65□□□□□ -0.54
GCOM1-207ENST00000477282 MYO15BQ96JP2 1530 aa11.63□□□□□ -0.55
GCOM1-207ENST00000477282 STAG3Q9UJ98 1225 aa11.63□□□□□ -0.55
GCOM1-207ENST00000477282 PROM2Q8N271 834 aa11.62□□□□□ -0.55
GCOM1-207ENST00000477282 ZCCHC6Q5VYS8 1495 aaKnown RBP11.61□□□□□ -0.55
GCOM1-207ENST00000477282 PRR29P0C7W0 189 aa11.55□□□□□ -0.56
GCOM1-207ENST00000477282 UNC13AQ9UPW8 1703 aa11.53□□□□□ -0.56
GCOM1-207ENST00000477282 DCAF1Q9Y4B6 1507 aa11.53□□□□□ -0.56
GCOM1-207ENST00000477282 FXR2P51116 673 aaKnown RBP eCLIP11.52□□□□□ -0.57
GCOM1-207ENST00000477282 POTEHQ6S545 545 aa11.52□□□□□ -0.57
GCOM1-207ENST00000477282 PIP4P2Q8N4L2 257 aa11.51□□□□□ -0.57
GCOM1-207ENST00000477282 BICRAQ9NZM4 1560 aa11.48□□□□□ -0.57
GCOM1-207ENST00000477282 PRKAR2AP13861 404 aaKnown RBP11.42□□□□□ -0.58
GCOM1-207ENST00000477282 FBXO3Q9UK99 471 aa11.42□□□□□ -0.58
GCOM1-207ENST00000477282 SCRIBQ14160 1630 aa11.41□□□□□ -0.58
GCOM1-207ENST00000477282 AMER1Q5JTC6 1135 aaPredicted RBP11.4□□□□□ -0.59
GCOM1-207ENST00000477282 PLEKHG5O94827 1062 aa11.33□□□□□ -0.6
GCOM1-207ENST00000477282 CHADLQ6NUI6 762 aa11.33□□□□□ -0.6
GCOM1-207ENST00000477282 CREBZFQ9NS37 354 aa11.31□□□□□ -0.6
GCOM1-207ENST00000477282 SHROOM4Q9ULL8 1493 aa11.3□□□□□ -0.6
GCOM1-207ENST00000477282 RTN4Q9NQC3 1192 aaKnown RBP11.3□□□□□ -0.6
GCOM1-207ENST00000477282 MIER1Q8N108 512 aa11.28□□□□□ -0.6
GCOM1-207ENST00000477282 FARP1Q9Y4F1 1045 aaPredicted RBP11.26□□□□□ -0.61
GCOM1-207ENST00000477282 PLCD3Q8N3E9 789 aa11.25□□□□□ -0.61
GCOM1-207ENST00000477282 NPM1P06748 294 aaKnown RBP eCLIP11.22□□□□□ -0.61
GCOM1-207ENST00000477282 ZBTB47Q9UFB7 747 aaPredicted RBP11.21□□□□□ -0.61
GCOM1-207ENST00000477282 HAX1O00165 279 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms