Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
GABREP78334 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.06■■□□□ 1.28
GABREP78334 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
GABREP78334 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
GABREP78334 TSPY9P-201ENST00000440215 945 ntBASIC23.05■■□□□ 1.28
GABREP78334 TSPY11P-201ENST00000442607 1045 ntBASIC23.05■■□□□ 1.28
GABREP78334 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.05■■□□□ 1.28
GABREP78334 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.05■■□□□ 1.28
GABREP78334 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
GABREP78334 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
GABREP78334 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
GABREP78334 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
GABREP78334 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
GABREP78334 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
GABREP78334 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.04■■□□□ 1.28
GABREP78334 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
GABREP78334 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
GABREP78334 KRT18P24-201ENST00000344739 1156 ntBASIC23.03■■□□□ 1.28
GABREP78334 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.03■■□□□ 1.28
GABREP78334 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.03■■□□□ 1.28
GABREP78334 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
GABREP78334 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
GABREP78334 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.02■■□□□ 1.28
GABREP78334 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
GABREP78334 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
GABREP78334 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
GABREP78334 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.01■■□□□ 1.27
GABREP78334 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
GABREP78334 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
GABREP78334 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
GABREP78334 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23■■□□□ 1.27
GABREP78334 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23■■□□□ 1.27
GABREP78334 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23■■□□□ 1.27
GABREP78334 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23■■□□□ 1.27
GABREP78334 MIR638-201ENST00000385237 100 ntBASIC22.99■■□□□ 1.27
GABREP78334 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.99■■□□□ 1.27
GABREP78334 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
GABREP78334 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
GABREP78334 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.98■■□□□ 1.27
GABREP78334 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.98■■□□□ 1.27
GABREP78334 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.98■■□□□ 1.27
GABREP78334 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
GABREP78334 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.98■■□□□ 1.27
GABREP78334 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
GABREP78334 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.97■■□□□ 1.27
GABREP78334 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.97■■□□□ 1.27
GABREP78334 AC137630.3-201ENST00000607245 391 ntBASIC22.97■■□□□ 1.27
GABREP78334 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
GABREP78334 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
GABREP78334 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.96■■□□□ 1.27
GABREP78334 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
GABREP78334 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.96■■□□□ 1.27
GABREP78334 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
GABREP78334 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.96■■□□□ 1.27
GABREP78334 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
GABREP78334 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
GABREP78334 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
GABREP78334 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
GABREP78334 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.95■■□□□ 1.26
GABREP78334 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.95■■□□□ 1.26
GABREP78334 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.95■■□□□ 1.26
GABREP78334 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.95■■□□□ 1.26
GABREP78334 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
GABREP78334 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.94■■□□□ 1.26
GABREP78334 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
GABREP78334 AC021242.3-201ENST00000607598 1377 ntBASIC22.94■■□□□ 1.26
GABREP78334 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
GABREP78334 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.94■■□□□ 1.26
GABREP78334 AC120024.1-201ENST00000562672 995 ntBASIC22.94■■□□□ 1.26
GABREP78334 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.94■■□□□ 1.26
GABREP78334 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.94■■□□□ 1.26
GABREP78334 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
GABREP78334 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
GABREP78334 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
GABREP78334 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
GABREP78334 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.93■■□□□ 1.26
GABREP78334 AL139246.5-201ENST00000606645 996 ntBASIC22.93■■□□□ 1.26
GABREP78334 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
GABREP78334 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
GABREP78334 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.92■■□□□ 1.26
GABREP78334 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
GABREP78334 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
GABREP78334 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
GABREP78334 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.92■■□□□ 1.26
GABREP78334 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.92■■□□□ 1.26
GABREP78334 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
GABREP78334 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
GABREP78334 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.91■■□□□ 1.26
GABREP78334 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
GABREP78334 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
GABREP78334 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
GABREP78334 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
GABREP78334 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
GABREP78334 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.9■■□□□ 1.26
GABREP78334 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.9■■□□□ 1.26
GABREP78334 AC131281.2-201ENST00000520478 145 ntBASIC22.9■■□□□ 1.26
GABREP78334 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.9■■□□□ 1.26
GABREP78334 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.9■■□□□ 1.26
GABREP78334 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
GABREP78334 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.89■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms