Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.58■■□□□ 1.04
CASP6P55212 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
CASP6P55212 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CASP6P55212 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
CASP6P55212 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.57■■□□□ 1.04
CASP6P55212 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CASP6P55212 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CASP6P55212 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CASP6P55212 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CASP6P55212 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CASP6P55212 KRT18P24-201ENST00000344739 1156 ntBASIC21.56■■□□□ 1.04
CASP6P55212 KRT16P3-201ENST00000439127 1283 ntBASIC21.56■■□□□ 1.04
CASP6P55212 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.56■■□□□ 1.04
CASP6P55212 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.56■■□□□ 1.04
CASP6P55212 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.56■■□□□ 1.04
CASP6P55212 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CASP6P55212 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.56■■□□□ 1.04
CASP6P55212 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.56■■□□□ 1.04
CASP6P55212 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CASP6P55212 ABCB10P1-201ENST00000614297 2181 ntBASIC21.55■■□□□ 1.04
CASP6P55212 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.55■■□□□ 1.04
CASP6P55212 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
CASP6P55212 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CASP6P55212 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CASP6P55212 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CASP6P55212 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CASP6P55212 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
CASP6P55212 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.54■■□□□ 1.04
CASP6P55212 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CASP6P55212 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CASP6P55212 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.53■■□□□ 1.04
CASP6P55212 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CASP6P55212 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CASP6P55212 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.53■■□□□ 1.04
CASP6P55212 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.53■■□□□ 1.04
CASP6P55212 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CASP6P55212 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CASP6P55212 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.52■■□□□ 1.04
CASP6P55212 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CASP6P55212 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CASP6P55212 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CASP6P55212 AL449106.1-201ENST00000608517 1980 ntBASIC21.51■■□□□ 1.03
CASP6P55212 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CASP6P55212 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.51■■□□□ 1.03
CASP6P55212 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CASP6P55212 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CASP6P55212 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CASP6P55212 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.5■■□□□ 1.03
CASP6P55212 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CASP6P55212 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CASP6P55212 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CASP6P55212 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CASP6P55212 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CASP6P55212 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CASP6P55212 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
CASP6P55212 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.49■■□□□ 1.03
CASP6P55212 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.49■■□□□ 1.03
CASP6P55212 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CASP6P55212 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CASP6P55212 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.49■■□□□ 1.03
CASP6P55212 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CASP6P55212 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.48■■□□□ 1.03
CASP6P55212 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CASP6P55212 TSPY9P-201ENST00000440215 945 ntBASIC21.48■■□□□ 1.03
CASP6P55212 TSPY11P-201ENST00000442607 1045 ntBASIC21.48■■□□□ 1.03
CASP6P55212 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CASP6P55212 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CASP6P55212 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.47■■□□□ 1.03
CASP6P55212 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.47■■□□□ 1.03
CASP6P55212 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.47■■□□□ 1.03
CASP6P55212 AC137630.3-201ENST00000607245 391 ntBASIC21.47■■□□□ 1.03
CASP6P55212 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CASP6P55212 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CASP6P55212 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CASP6P55212 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CASP6P55212 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.46■■□□□ 1.03
CASP6P55212 UNC93B8-201ENST00000511903 705 ntBASIC21.46■■□□□ 1.03
CASP6P55212 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.46■■□□□ 1.03
CASP6P55212 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.46■■□□□ 1.03
CASP6P55212 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CASP6P55212 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.46■■□□□ 1.03
CASP6P55212 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
CASP6P55212 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
CASP6P55212 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CASP6P55212 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CASP6P55212 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CASP6P55212 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CASP6P55212 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CASP6P55212 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.45■■□□□ 1.02
CASP6P55212 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CASP6P55212 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.45■■□□□ 1.02
CASP6P55212 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.45■■□□□ 1.02
CASP6P55212 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CASP6P55212 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
CASP6P55212 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CASP6P55212 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CASP6P55212 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CASP6P55212 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.44■■□□□ 1.02
CASP6P55212 AC120024.1-201ENST00000562672 995 ntBASIC21.44■■□□□ 1.02
CASP6P55212 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms