Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 BX664725.1-201ENST00000438252 379 ntBASIC27.01■■□□□ 1.91
CPT1AP50416 CREM-229ENST00000474362 1030 ntTSL 2 BASIC27.01■■□□□ 1.91
CPT1AP50416 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC27.01■■□□□ 1.91
CPT1AP50416 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CPT1AP50416 KRT18P24-201ENST00000344739 1156 ntBASIC27■■□□□ 1.91
CPT1AP50416 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
CPT1AP50416 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC27■■□□□ 1.91
CPT1AP50416 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC27■■□□□ 1.91
CPT1AP50416 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CPT1AP50416 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CPT1AP50416 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
CPT1AP50416 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
CPT1AP50416 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.99■■□□□ 1.91
CPT1AP50416 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
CPT1AP50416 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
CPT1AP50416 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.98■■□□□ 1.91
CPT1AP50416 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
CPT1AP50416 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
CPT1AP50416 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.98■■□□□ 1.91
CPT1AP50416 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CPT1AP50416 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CPT1AP50416 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CPT1AP50416 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CPT1AP50416 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.97■■□□□ 1.91
CPT1AP50416 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
CPT1AP50416 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CPT1AP50416 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.96■■□□□ 1.91
CPT1AP50416 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
CPT1AP50416 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.96■■□□□ 1.91
CPT1AP50416 MIR4787-201ENST00000607364 84 ntBASIC26.96■■□□□ 1.91
CPT1AP50416 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CPT1AP50416 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
CPT1AP50416 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
CPT1AP50416 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
CPT1AP50416 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.95■■□□□ 1.9
CPT1AP50416 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.95■■□□□ 1.9
CPT1AP50416 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.95■■□□□ 1.9
CPT1AP50416 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.94■■□□□ 1.9
CPT1AP50416 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.94■■□□□ 1.9
CPT1AP50416 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
CPT1AP50416 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CPT1AP50416 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.94■■□□□ 1.9
CPT1AP50416 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CPT1AP50416 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CPT1AP50416 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CPT1AP50416 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CPT1AP50416 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
CPT1AP50416 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.93■■□□□ 1.9
CPT1AP50416 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CPT1AP50416 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CPT1AP50416 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CPT1AP50416 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CPT1AP50416 AC019069.1-201ENST00000610008 1333 ntBASIC26.92■■□□□ 1.9
CPT1AP50416 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
CPT1AP50416 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CPT1AP50416 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CPT1AP50416 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CPT1AP50416 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CPT1AP50416 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CPT1AP50416 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.9■■□□□ 1.9
CPT1AP50416 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.9■■□□□ 1.9
CPT1AP50416 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CPT1AP50416 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CPT1AP50416 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.9■■□□□ 1.9
CPT1AP50416 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
CPT1AP50416 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.89■■□□□ 1.9
CPT1AP50416 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.89■■□□□ 1.9
CPT1AP50416 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.89■■□□□ 1.9
CPT1AP50416 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
CPT1AP50416 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
CPT1AP50416 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
CPT1AP50416 AP004609.3-201ENST00000610705 1884 ntBASIC26.89■■□□□ 1.89
CPT1AP50416 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
CPT1AP50416 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CPT1AP50416 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CPT1AP50416 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CPT1AP50416 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.88■■□□□ 1.89
CPT1AP50416 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.88■■□□□ 1.89
CPT1AP50416 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.88■■□□□ 1.89
CPT1AP50416 AC120024.1-201ENST00000562672 995 ntBASIC26.88■■□□□ 1.89
CPT1AP50416 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.88■■□□□ 1.89
CPT1AP50416 AC137630.3-201ENST00000607245 391 ntBASIC26.88■■□□□ 1.89
CPT1AP50416 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.87■■□□□ 1.89
CPT1AP50416 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
CPT1AP50416 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CPT1AP50416 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.86■■□□□ 1.89
CPT1AP50416 AC008406.3-201ENST00000620001 1374 ntBASIC26.85■■□□□ 1.89
CPT1AP50416 UNC93B8-201ENST00000511903 705 ntBASIC26.85■■□□□ 1.89
CPT1AP50416 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CPT1AP50416 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
CPT1AP50416 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CPT1AP50416 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.85■■□□□ 1.89
CPT1AP50416 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.84■■□□□ 1.89
CPT1AP50416 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CPT1AP50416 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.84■■□□□ 1.89
CPT1AP50416 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CPT1AP50416 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CPT1AP50416 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.84■■□□□ 1.89
CPT1AP50416 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CPT1AP50416 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms