Protein–RNA interactions for Protein: P18077

RPL35A, 60S ribosomal protein L35a, humanhuman

Known RBP Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35AP18077 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
RPL35AP18077 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPL35AP18077 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPL35AP18077 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPL35AP18077 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RPL35AP18077 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RPL35AP18077 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPL35AP18077 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPL35AP18077 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.81■□□□□ 0.44
RPL35AP18077 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPL35AP18077 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPL35AP18077 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPL35AP18077 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RPL35AP18077 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPL35AP18077 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPL35AP18077 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.8■□□□□ 0.44
RPL35AP18077 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.8■□□□□ 0.44
RPL35AP18077 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPL35AP18077 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPL35AP18077 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPL35AP18077 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPL35AP18077 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPL35AP18077 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPL35AP18077 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPL35AP18077 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RPL35AP18077 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPL35AP18077 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPL35AP18077 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPL35AP18077 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPL35AP18077 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPL35AP18077 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPL35AP18077 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RPL35AP18077 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RPL35AP18077 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPL35AP18077 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPL35AP18077 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.77■□□□□ 0.44
RPL35AP18077 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.77■□□□□ 0.44
RPL35AP18077 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.77■□□□□ 0.44
RPL35AP18077 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RPL35AP18077 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RPL35AP18077 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RPL35AP18077 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPL35AP18077 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.76■□□□□ 0.43
RPL35AP18077 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPL35AP18077 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPL35AP18077 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPL35AP18077 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPL35AP18077 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RPL35AP18077 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPL35AP18077 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.75■□□□□ 0.43
RPL35AP18077 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPL35AP18077 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.75■□□□□ 0.43
RPL35AP18077 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPL35AP18077 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPL35AP18077 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.75■□□□□ 0.43
RPL35AP18077 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
RPL35AP18077 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.74■□□□□ 0.43
RPL35AP18077 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RPL35AP18077 AC010980.1-201ENST00000587192 1142 ntBASIC17.74■□□□□ 0.43
RPL35AP18077 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPL35AP18077 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPL35AP18077 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPL35AP18077 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPL35AP18077 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC17.73■□□□□ 0.43
RPL35AP18077 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPL35AP18077 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPL35AP18077 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPL35AP18077 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
RPL35AP18077 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.73■□□□□ 0.43
RPL35AP18077 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPL35AP18077 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPL35AP18077 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPL35AP18077 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.72■□□□□ 0.43
RPL35AP18077 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.72■□□□□ 0.43
RPL35AP18077 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPL35AP18077 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPL35AP18077 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.72■□□□□ 0.43
RPL35AP18077 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPL35AP18077 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.72■□□□□ 0.43
RPL35AP18077 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RPL35AP18077 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPL35AP18077 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RPL35AP18077 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RPL35AP18077 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RPL35AP18077 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.7■□□□□ 0.42
RPL35AP18077 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPL35AP18077 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPL35AP18077 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.7■□□□□ 0.42
RPL35AP18077 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPL35AP18077 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPL35AP18077 KRT8P33-201ENST00000508125 1423 ntBASIC17.7■□□□□ 0.42
RPL35AP18077 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPL35AP18077 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.7■□□□□ 0.42
RPL35AP18077 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPL35AP18077 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.69■□□□□ 0.42
RPL35AP18077 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.69■□□□□ 0.42
RPL35AP18077 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.69■□□□□ 0.42
RPL35AP18077 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
RPL35AP18077 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPL35AP18077 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms