Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PF4V1P10720 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PF4V1P10720 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.97■□□□□ 0.63
PF4V1P10720 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PF4V1P10720 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PF4V1P10720 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.96■□□□□ 0.63
PF4V1P10720 AC074183.2-201ENST00000623112 922 ntBASIC18.96■□□□□ 0.63
PF4V1P10720 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
PF4V1P10720 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PF4V1P10720 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PF4V1P10720 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PF4V1P10720 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PF4V1P10720 AC010980.1-201ENST00000587192 1142 ntBASIC18.95■□□□□ 0.62
PF4V1P10720 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
PF4V1P10720 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.95■□□□□ 0.62
PF4V1P10720 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PF4V1P10720 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PF4V1P10720 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.94■□□□□ 0.62
PF4V1P10720 KRT8P33-201ENST00000508125 1423 ntBASIC18.94■□□□□ 0.62
PF4V1P10720 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PF4V1P10720 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PF4V1P10720 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
PF4V1P10720 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PF4V1P10720 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PF4V1P10720 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PF4V1P10720 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.93■□□□□ 0.62
PF4V1P10720 YBX1P4-201ENST00000392794 808 ntBASIC18.93■□□□□ 0.62
PF4V1P10720 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.93■□□□□ 0.62
PF4V1P10720 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PF4V1P10720 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PF4V1P10720 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.93■□□□□ 0.62
PF4V1P10720 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.93■□□□□ 0.62
PF4V1P10720 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PF4V1P10720 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PF4V1P10720 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PF4V1P10720 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PF4V1P10720 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PF4V1P10720 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PF4V1P10720 SPCS2P3-201ENST00000500401 656 ntBASIC18.92■□□□□ 0.62
PF4V1P10720 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PF4V1P10720 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PF4V1P10720 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PF4V1P10720 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
PF4V1P10720 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.92■□□□□ 0.62
PF4V1P10720 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PF4V1P10720 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PF4V1P10720 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PF4V1P10720 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.91■□□□□ 0.62
PF4V1P10720 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.91■□□□□ 0.62
PF4V1P10720 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.91■□□□□ 0.62
PF4V1P10720 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.91■□□□□ 0.62
PF4V1P10720 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PF4V1P10720 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PF4V1P10720 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.9■□□□□ 0.62
PF4V1P10720 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PF4V1P10720 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PF4V1P10720 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PF4V1P10720 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.9■□□□□ 0.62
PF4V1P10720 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PF4V1P10720 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PF4V1P10720 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PF4V1P10720 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PF4V1P10720 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PF4V1P10720 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.89■□□□□ 0.61
PF4V1P10720 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PF4V1P10720 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PF4V1P10720 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PF4V1P10720 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PF4V1P10720 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PF4V1P10720 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PF4V1P10720 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
PF4V1P10720 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.88■□□□□ 0.61
PF4V1P10720 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.88■□□□□ 0.61
PF4V1P10720 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.88■□□□□ 0.61
PF4V1P10720 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PF4V1P10720 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PF4V1P10720 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.87■□□□□ 0.61
PF4V1P10720 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PF4V1P10720 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PF4V1P10720 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.87■□□□□ 0.61
PF4V1P10720 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.87■□□□□ 0.61
PF4V1P10720 AL035685.1-201ENST00000636663 812 ntBASIC18.87■□□□□ 0.61
PF4V1P10720 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PF4V1P10720 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PF4V1P10720 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PF4V1P10720 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PF4V1P10720 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PF4V1P10720 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.86■□□□□ 0.61
PF4V1P10720 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.86■□□□□ 0.61
PF4V1P10720 AL451085.2-201ENST00000605085 799 ntBASIC18.86■□□□□ 0.61
PF4V1P10720 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.86■□□□□ 0.61
PF4V1P10720 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PF4V1P10720 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PF4V1P10720 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PF4V1P10720 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PF4V1P10720 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PF4V1P10720 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PF4V1P10720 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.85■□□□□ 0.61
PF4V1P10720 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PF4V1P10720 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms