Protein–RNA interactions for Protein: P09619

PDGFRB, Platelet-derived growth factor receptor beta, humanhuman

Predictions only

Length 1,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRBP09619 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
PDGFRBP09619 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.69■■□□□ 1.7
PDGFRBP09619 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.69■■□□□ 1.7
PDGFRBP09619 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.69■■□□□ 1.7
PDGFRBP09619 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PDGFRBP09619 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PDGFRBP09619 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
PDGFRBP09619 BHLHE23-202ENST00000612929 1109 ntBASIC25.68■■□□□ 1.7
PDGFRBP09619 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PDGFRBP09619 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.68■■□□□ 1.7
PDGFRBP09619 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PDGFRBP09619 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PDGFRBP09619 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.67■■□□□ 1.7
PDGFRBP09619 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
PDGFRBP09619 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PDGFRBP09619 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
PDGFRBP09619 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PDGFRBP09619 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.66■■□□□ 1.7
PDGFRBP09619 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.66■■□□□ 1.7
PDGFRBP09619 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PDGFRBP09619 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
PDGFRBP09619 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.65■■□□□ 1.7
PDGFRBP09619 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PDGFRBP09619 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.65■■□□□ 1.7
PDGFRBP09619 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
PDGFRBP09619 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PDGFRBP09619 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PDGFRBP09619 AC139795.1-202ENST00000500444 432 ntBASIC25.64■■□□□ 1.7
PDGFRBP09619 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
PDGFRBP09619 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PDGFRBP09619 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PDGFRBP09619 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
PDGFRBP09619 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.63■■□□□ 1.69
PDGFRBP09619 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PDGFRBP09619 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PDGFRBP09619 ERN1-208ENST00000606895 2068 ntBASIC25.63■■□□□ 1.69
PDGFRBP09619 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PDGFRBP09619 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PDGFRBP09619 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC25.62■■□□□ 1.69
PDGFRBP09619 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDGFRBP09619 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PDGFRBP09619 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PDGFRBP09619 HYI-210ENST00000486909 905 ntTSL 5 BASIC25.61■■□□□ 1.69
PDGFRBP09619 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.61■■□□□ 1.69
PDGFRBP09619 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC25.61■■□□□ 1.69
PDGFRBP09619 AC010980.1-201ENST00000587192 1142 ntBASIC25.61■■□□□ 1.69
PDGFRBP09619 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
PDGFRBP09619 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PDGFRBP09619 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.6■■□□□ 1.69
PDGFRBP09619 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PDGFRBP09619 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.6■■□□□ 1.69
PDGFRBP09619 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PDGFRBP09619 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
PDGFRBP09619 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PDGFRBP09619 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC25.59■■□□□ 1.69
PDGFRBP09619 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.59■■□□□ 1.69
PDGFRBP09619 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
PDGFRBP09619 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PDGFRBP09619 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
PDGFRBP09619 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PDGFRBP09619 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
PDGFRBP09619 RPS2P7-201ENST00000447334 885 ntBASIC25.58■■□□□ 1.69
PDGFRBP09619 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PDGFRBP09619 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.57■■□□□ 1.68
PDGFRBP09619 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.57■■□□□ 1.68
PDGFRBP09619 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PDGFRBP09619 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PDGFRBP09619 AC087393.1-201ENST00000582896 145 ntBASIC25.56■■□□□ 1.68
PDGFRBP09619 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
PDGFRBP09619 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
PDGFRBP09619 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.56■■□□□ 1.68
PDGFRBP09619 AC092803.2-201ENST00000564287 1899 ntBASIC25.55■■□□□ 1.68
PDGFRBP09619 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PDGFRBP09619 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.55■■□□□ 1.68
PDGFRBP09619 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PDGFRBP09619 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PDGFRBP09619 PVT1_1.1-201ENST00000615125 194 ntBASIC25.55■■□□□ 1.68
PDGFRBP09619 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.55■■□□□ 1.68
PDGFRBP09619 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PDGFRBP09619 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.55■■□□□ 1.68
PDGFRBP09619 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
PDGFRBP09619 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.55■■□□□ 1.68
PDGFRBP09619 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
PDGFRBP09619 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PDGFRBP09619 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PDGFRBP09619 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.54■■□□□ 1.68
PDGFRBP09619 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PDGFRBP09619 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PDGFRBP09619 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.54■■□□□ 1.68
PDGFRBP09619 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PDGFRBP09619 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PDGFRBP09619 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
PDGFRBP09619 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.54■■□□□ 1.68
PDGFRBP09619 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PDGFRBP09619 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
PDGFRBP09619 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.53■■□□□ 1.68
PDGFRBP09619 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.53■■□□□ 1.68
PDGFRBP09619 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.53■■□□□ 1.68
PDGFRBP09619 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PDGFRBP09619 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 278.8 ms