Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.28■■□□□ 1.8
CLTAP09496 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.28■■□□□ 1.8
CLTAP09496 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
CLTAP09496 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.28■■□□□ 1.8
CLTAP09496 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC26.27■■□□□ 1.8
CLTAP09496 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.27■■□□□ 1.8
CLTAP09496 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CLTAP09496 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.26■■□□□ 1.79
CLTAP09496 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CLTAP09496 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CLTAP09496 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
CLTAP09496 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CLTAP09496 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CLTAP09496 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CLTAP09496 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CLTAP09496 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CLTAP09496 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CLTAP09496 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.24■■□□□ 1.79
CLTAP09496 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CLTAP09496 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.24■■□□□ 1.79
CLTAP09496 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.24■■□□□ 1.79
CLTAP09496 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
CLTAP09496 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.24■■□□□ 1.79
CLTAP09496 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CLTAP09496 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
CLTAP09496 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CLTAP09496 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CLTAP09496 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CLTAP09496 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.23■■□□□ 1.79
CLTAP09496 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.23■■□□□ 1.79
CLTAP09496 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CLTAP09496 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.23■■□□□ 1.79
CLTAP09496 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CLTAP09496 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
CLTAP09496 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CLTAP09496 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CLTAP09496 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CLTAP09496 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.21■■□□□ 1.79
CLTAP09496 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
CLTAP09496 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.21■■□□□ 1.79
CLTAP09496 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
CLTAP09496 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CLTAP09496 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
CLTAP09496 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.21■■□□□ 1.79
CLTAP09496 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.2■■□□□ 1.79
CLTAP09496 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
CLTAP09496 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CLTAP09496 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC26.2■■□□□ 1.78
CLTAP09496 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
CLTAP09496 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.2■■□□□ 1.78
CLTAP09496 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.2■■□□□ 1.78
CLTAP09496 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CLTAP09496 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
CLTAP09496 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CLTAP09496 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC26.19■■□□□ 1.78
CLTAP09496 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC26.19■■□□□ 1.78
CLTAP09496 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
CLTAP09496 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
CLTAP09496 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
CLTAP09496 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.18■■□□□ 1.78
CLTAP09496 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CLTAP09496 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CLTAP09496 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC26.18■■□□□ 1.78
CLTAP09496 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.18■■□□□ 1.78
CLTAP09496 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CLTAP09496 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CLTAP09496 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
CLTAP09496 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.17■■□□□ 1.78
CLTAP09496 KRT18P10-201ENST00000388836 1287 ntBASIC26.17■■□□□ 1.78
CLTAP09496 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CLTAP09496 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
CLTAP09496 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CLTAP09496 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CLTAP09496 HYI-210ENST00000486909 905 ntTSL 5 BASIC26.16■■□□□ 1.78
CLTAP09496 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.16■■□□□ 1.78
CLTAP09496 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
CLTAP09496 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CLTAP09496 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CLTAP09496 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC26.15■■□□□ 1.78
CLTAP09496 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
CLTAP09496 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.14■■□□□ 1.78
CLTAP09496 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CLTAP09496 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CLTAP09496 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CLTAP09496 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC26.14■■□□□ 1.78
CLTAP09496 BHLHE23-202ENST00000612929 1109 ntBASIC26.14■■□□□ 1.78
CLTAP09496 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.14■■□□□ 1.77
CLTAP09496 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CLTAP09496 AC139795.1-202ENST00000500444 432 ntBASIC26.13■■□□□ 1.77
CLTAP09496 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.13■■□□□ 1.77
CLTAP09496 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CLTAP09496 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CLTAP09496 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CLTAP09496 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CLTAP09496 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CLTAP09496 RPS2P7-201ENST00000447334 885 ntBASIC26.12■■□□□ 1.77
CLTAP09496 AC087393.1-201ENST00000582896 145 ntBASIC26.12■■□□□ 1.77
CLTAP09496 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CLTAP09496 AC074183.2-201ENST00000623112 922 ntBASIC26.12■■□□□ 1.77
CLTAP09496 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms