Protein–RNA interactions for Protein: P08294

SOD3, Extracellular superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3P08294 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SOD3P08294 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.7■□□□□ 0.9
SOD3P08294 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.7■□□□□ 0.9
SOD3P08294 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
SOD3P08294 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SOD3P08294 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SOD3P08294 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SOD3P08294 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SOD3P08294 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SOD3P08294 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.69■□□□□ 0.9
SOD3P08294 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SOD3P08294 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SOD3P08294 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.69■□□□□ 0.9
SOD3P08294 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.69■□□□□ 0.9
SOD3P08294 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SOD3P08294 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SOD3P08294 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.69■□□□□ 0.9
SOD3P08294 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SOD3P08294 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SOD3P08294 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SOD3P08294 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.68■□□□□ 0.9
SOD3P08294 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SOD3P08294 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SOD3P08294 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SOD3P08294 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SOD3P08294 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.68■□□□□ 0.9
SOD3P08294 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SOD3P08294 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SOD3P08294 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SOD3P08294 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SOD3P08294 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SOD3P08294 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SOD3P08294 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
SOD3P08294 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SOD3P08294 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SOD3P08294 GUSBP5-201ENST00000418136 578 ntBASIC20.67■□□□□ 0.9
SOD3P08294 LONRF2P2-201ENST00000439212 571 ntBASIC20.67■□□□□ 0.9
SOD3P08294 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SOD3P08294 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SOD3P08294 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.67■□□□□ 0.9
SOD3P08294 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SOD3P08294 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SOD3P08294 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SOD3P08294 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.66■□□□□ 0.9
SOD3P08294 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SOD3P08294 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SOD3P08294 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SOD3P08294 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.65■□□□□ 0.9
SOD3P08294 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
SOD3P08294 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.65■□□□□ 0.9
SOD3P08294 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SOD3P08294 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
SOD3P08294 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.65■□□□□ 0.9
SOD3P08294 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.65■□□□□ 0.9
SOD3P08294 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SOD3P08294 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SOD3P08294 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.65■□□□□ 0.9
SOD3P08294 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.65■□□□□ 0.9
SOD3P08294 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SOD3P08294 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SOD3P08294 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SOD3P08294 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SOD3P08294 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SOD3P08294 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.64■□□□□ 0.89
SOD3P08294 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SOD3P08294 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.64■□□□□ 0.89
SOD3P08294 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SOD3P08294 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
SOD3P08294 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SOD3P08294 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.63■□□□□ 0.89
SOD3P08294 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.63■□□□□ 0.89
SOD3P08294 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SOD3P08294 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
SOD3P08294 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SOD3P08294 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.63■□□□□ 0.89
SOD3P08294 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SOD3P08294 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SOD3P08294 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SOD3P08294 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SOD3P08294 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SOD3P08294 BX255925.1-201ENST00000566954 1854 ntBASIC20.62■□□□□ 0.89
SOD3P08294 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.62■□□□□ 0.89
SOD3P08294 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SOD3P08294 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.62■□□□□ 0.89
SOD3P08294 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SOD3P08294 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SOD3P08294 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOD3P08294 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOD3P08294 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
SOD3P08294 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SOD3P08294 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.61■□□□□ 0.89
SOD3P08294 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SOD3P08294 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SOD3P08294 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SOD3P08294 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SOD3P08294 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.6■□□□□ 0.89
SOD3P08294 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.6■□□□□ 0.89
SOD3P08294 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.6■□□□□ 0.89
SOD3P08294 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.6■□□□□ 0.89
SOD3P08294 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms