Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CSN3P07498 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSN3P07498 RP9P-202ENST00000450133 1212 ntBASIC18.64■□□□□ 0.57
CSN3P07498 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CSN3P07498 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSN3P07498 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.64■□□□□ 0.57
CSN3P07498 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.64■□□□□ 0.57
CSN3P07498 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CSN3P07498 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSN3P07498 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CSN3P07498 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSN3P07498 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSN3P07498 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CSN3P07498 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.63■□□□□ 0.57
CSN3P07498 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CSN3P07498 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.63■□□□□ 0.57
CSN3P07498 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.62■□□□□ 0.57
CSN3P07498 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSN3P07498 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSN3P07498 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.62■□□□□ 0.57
CSN3P07498 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CSN3P07498 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CSN3P07498 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CSN3P07498 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSN3P07498 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSN3P07498 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CSN3P07498 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.61■□□□□ 0.57
CSN3P07498 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.61■□□□□ 0.57
CSN3P07498 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSN3P07498 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSN3P07498 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CSN3P07498 AC093536.1-201ENST00000569153 554 ntBASIC18.61■□□□□ 0.57
CSN3P07498 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSN3P07498 AC020928.2-201ENST00000588717 2197 ntBASIC18.61■□□□□ 0.57
CSN3P07498 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CSN3P07498 AC091060.1-201ENST00000623524 1766 ntBASIC18.6■□□□□ 0.57
CSN3P07498 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CSN3P07498 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CSN3P07498 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CSN3P07498 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CSN3P07498 AC026202.3-201ENST00000600805 1127 ntBASIC18.6■□□□□ 0.57
CSN3P07498 AC133552.2-201ENST00000619106 1032 ntBASIC18.6■□□□□ 0.57
CSN3P07498 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSN3P07498 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CSN3P07498 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CSN3P07498 AC009831.1-201ENST00000580420 1582 ntBASIC18.59■□□□□ 0.57
CSN3P07498 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CSN3P07498 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.59■□□□□ 0.57
CSN3P07498 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CSN3P07498 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CSN3P07498 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.59■□□□□ 0.57
CSN3P07498 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CSN3P07498 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CSN3P07498 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CSN3P07498 AC142472.1-201ENST00000612013 1741 ntBASIC18.59■□□□□ 0.57
CSN3P07498 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSN3P07498 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSN3P07498 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.59■□□□□ 0.57
CSN3P07498 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.58■□□□□ 0.56
CSN3P07498 AP004609.3-201ENST00000610705 1884 ntBASIC18.58■□□□□ 0.56
CSN3P07498 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSN3P07498 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CSN3P07498 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.58■□□□□ 0.56
CSN3P07498 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSN3P07498 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSN3P07498 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.57■□□□□ 0.56
CSN3P07498 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSN3P07498 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSN3P07498 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSN3P07498 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CSN3P07498 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.57■□□□□ 0.56
CSN3P07498 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CSN3P07498 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.57■□□□□ 0.56
CSN3P07498 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
CSN3P07498 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CSN3P07498 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSN3P07498 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSN3P07498 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSN3P07498 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSN3P07498 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSN3P07498 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSN3P07498 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CSN3P07498 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CSN3P07498 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSN3P07498 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSN3P07498 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSN3P07498 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
CSN3P07498 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CSN3P07498 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.55■□□□□ 0.56
CSN3P07498 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSN3P07498 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSN3P07498 KRT18P60-201ENST00000312876 1297 ntBASIC18.55■□□□□ 0.56
CSN3P07498 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.55■□□□□ 0.56
CSN3P07498 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSN3P07498 RAP2CP1-202ENST00000605179 643 ntBASIC18.55■□□□□ 0.56
CSN3P07498 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.55■□□□□ 0.56
CSN3P07498 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CSN3P07498 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSN3P07498 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSN3P07498 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms