Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
PGK1P00558 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.13■■□□□ 1.93
PGK1P00558 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC27.13■■□□□ 1.93
PGK1P00558 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
PGK1P00558 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
PGK1P00558 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC27.12■■□□□ 1.93
PGK1P00558 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC27.12■■□□□ 1.93
PGK1P00558 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PGK1P00558 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PGK1P00558 KRT18P10-201ENST00000388836 1287 ntBASIC27.11■■□□□ 1.93
PGK1P00558 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC27.11■■□□□ 1.93
PGK1P00558 TSPY9P-201ENST00000440215 945 ntBASIC27.11■■□□□ 1.93
PGK1P00558 TSPY11P-201ENST00000442607 1045 ntBASIC27.11■■□□□ 1.93
PGK1P00558 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC27.11■■□□□ 1.93
PGK1P00558 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
PGK1P00558 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PGK1P00558 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PGK1P00558 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC27.1■■□□□ 1.93
PGK1P00558 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PGK1P00558 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
PGK1P00558 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
PGK1P00558 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC27.1■■□□□ 1.93
PGK1P00558 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC27.1■■□□□ 1.93
PGK1P00558 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
PGK1P00558 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
PGK1P00558 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC27.09■■□□□ 1.93
PGK1P00558 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PGK1P00558 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PGK1P00558 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
PGK1P00558 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
PGK1P00558 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
PGK1P00558 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.07■■□□□ 1.92
PGK1P00558 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
PGK1P00558 AC137630.3-201ENST00000607245 391 ntBASIC27.07■■□□□ 1.92
PGK1P00558 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC27.07■■□□□ 1.92
PGK1P00558 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
PGK1P00558 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PGK1P00558 AC120024.1-201ENST00000562672 995 ntBASIC27.06■■□□□ 1.92
PGK1P00558 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC27.06■■□□□ 1.92
PGK1P00558 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
PGK1P00558 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PGK1P00558 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC27.05■■□□□ 1.92
PGK1P00558 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
PGK1P00558 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC27.04■■□□□ 1.92
PGK1P00558 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC27.04■■□□□ 1.92
PGK1P00558 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PGK1P00558 DRD5P2-201ENST00000421395 2012 ntBASIC27.04■■□□□ 1.92
PGK1P00558 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC27.04■■□□□ 1.92
PGK1P00558 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PGK1P00558 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PGK1P00558 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
PGK1P00558 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PGK1P00558 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC27.03■■□□□ 1.92
PGK1P00558 AC021242.3-201ENST00000607598 1377 ntBASIC27.03■■□□□ 1.92
PGK1P00558 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PGK1P00558 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PGK1P00558 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.02■■□□□ 1.92
PGK1P00558 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PGK1P00558 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
PGK1P00558 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.01■■□□□ 1.91
PGK1P00558 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
PGK1P00558 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC27.01■■□□□ 1.91
PGK1P00558 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
PGK1P00558 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PGK1P00558 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC27.01■■□□□ 1.91
PGK1P00558 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
PGK1P00558 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
PGK1P00558 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PGK1P00558 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27■■□□□ 1.91
PGK1P00558 MIR638-201ENST00000385237 100 ntBASIC27■■□□□ 1.91
PGK1P00558 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC27■■□□□ 1.91
PGK1P00558 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC27■■□□□ 1.91
PGK1P00558 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC27■■□□□ 1.91
PGK1P00558 TRIR-202ENST00000588213 841 ntTSL 3 BASIC27■■□□□ 1.91
PGK1P00558 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PGK1P00558 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.99■■□□□ 1.91
PGK1P00558 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.99■■□□□ 1.91
PGK1P00558 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PGK1P00558 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PGK1P00558 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.99■■□□□ 1.91
PGK1P00558 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.99■■□□□ 1.91
PGK1P00558 BX255925.1-201ENST00000566954 1854 ntBASIC26.99■■□□□ 1.91
PGK1P00558 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.99■■□□□ 1.91
PGK1P00558 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PGK1P00558 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.99■■□□□ 1.91
PGK1P00558 AC139426.1-201ENST00000568218 2529 ntBASIC26.98■■□□□ 1.91
PGK1P00558 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
PGK1P00558 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.97■■□□□ 1.91
PGK1P00558 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PGK1P00558 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.96■■□□□ 1.91
PGK1P00558 AC092028.1-203ENST00000608262 953 ntBASIC26.96■■□□□ 1.91
PGK1P00558 LINC01003-201ENST00000564834 1764 ntBASIC26.96■■□□□ 1.91
PGK1P00558 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PGK1P00558 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PGK1P00558 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.95■■□□□ 1.9
PGK1P00558 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PGK1P00558 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
PGK1P00558 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PGK1P00558 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
PGK1P00558 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms