Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TOMM40O96008 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TOMM40O96008 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.72■□□□□ 0.59
TOMM40O96008 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TOMM40O96008 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TOMM40O96008 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOMM40O96008 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.71■□□□□ 0.59
TOMM40O96008 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TOMM40O96008 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TOMM40O96008 AC096887.2-201ENST00000623443 1957 ntBASIC18.71■□□□□ 0.59
TOMM40O96008 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOMM40O96008 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
TOMM40O96008 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.7■□□□□ 0.58
TOMM40O96008 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.7■□□□□ 0.58
TOMM40O96008 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TOMM40O96008 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TOMM40O96008 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TOMM40O96008 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TOMM40O96008 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOMM40O96008 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TOMM40O96008 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOMM40O96008 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TOMM40O96008 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOMM40O96008 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOMM40O96008 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TOMM40O96008 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TOMM40O96008 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TOMM40O96008 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TOMM40O96008 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.68■□□□□ 0.58
TOMM40O96008 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.68■□□□□ 0.58
TOMM40O96008 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.68■□□□□ 0.58
TOMM40O96008 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.68■□□□□ 0.58
TOMM40O96008 AC142381.3-201ENST00000568208 1670 ntBASIC18.68■□□□□ 0.58
TOMM40O96008 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TOMM40O96008 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
TOMM40O96008 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
TOMM40O96008 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TOMM40O96008 AC016575.1-201ENST00000607026 382 ntBASIC18.67■□□□□ 0.58
TOMM40O96008 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOMM40O96008 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TOMM40O96008 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TOMM40O96008 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TOMM40O96008 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TOMM40O96008 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TOMM40O96008 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TOMM40O96008 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.66■□□□□ 0.58
TOMM40O96008 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TOMM40O96008 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOMM40O96008 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOMM40O96008 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.65■□□□□ 0.58
TOMM40O96008 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TOMM40O96008 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOMM40O96008 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOMM40O96008 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TOMM40O96008 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOMM40O96008 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOMM40O96008 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOMM40O96008 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOMM40O96008 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TOMM40O96008 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TOMM40O96008 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TOMM40O96008 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TOMM40O96008 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.64■□□□□ 0.57
TOMM40O96008 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TOMM40O96008 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TOMM40O96008 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TOMM40O96008 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TOMM40O96008 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
TOMM40O96008 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TOMM40O96008 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TOMM40O96008 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TOMM40O96008 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.63■□□□□ 0.57
TOMM40O96008 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TOMM40O96008 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TOMM40O96008 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TOMM40O96008 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TOMM40O96008 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TOMM40O96008 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TOMM40O96008 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TOMM40O96008 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TOMM40O96008 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TOMM40O96008 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TOMM40O96008 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TOMM40O96008 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.61■□□□□ 0.57
TOMM40O96008 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TOMM40O96008 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.61■□□□□ 0.57
TOMM40O96008 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
TOMM40O96008 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TOMM40O96008 AC022211.4-201ENST00000625094 2161 ntBASIC18.61■□□□□ 0.57
TOMM40O96008 LINC00543-201ENST00000567234 1845 ntBASIC18.6■□□□□ 0.57
TOMM40O96008 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TOMM40O96008 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOMM40O96008 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOMM40O96008 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TOMM40O96008 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.6■□□□□ 0.57
TOMM40O96008 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.6■□□□□ 0.57
TOMM40O96008 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.6■□□□□ 0.57
TOMM40O96008 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TOMM40O96008 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOMM40O96008 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms