Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.33■□□□□ 0.85
TSPAN9O75954 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TSPAN9O75954 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TSPAN9O75954 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TSPAN9O75954 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.33■□□□□ 0.85
TSPAN9O75954 GPX1-201ENST00000419349 1106 ntBASIC20.33■□□□□ 0.85
TSPAN9O75954 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.33■□□□□ 0.85
TSPAN9O75954 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.33■□□□□ 0.84
TSPAN9O75954 RARRES2P2-201ENST00000394842 485 ntBASIC20.32■□□□□ 0.84
TSPAN9O75954 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.32■□□□□ 0.84
TSPAN9O75954 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
TSPAN9O75954 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TSPAN9O75954 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TSPAN9O75954 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TSPAN9O75954 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TSPAN9O75954 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TSPAN9O75954 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TSPAN9O75954 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.32■□□□□ 0.84
TSPAN9O75954 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TSPAN9O75954 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TSPAN9O75954 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TSPAN9O75954 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TSPAN9O75954 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.31■□□□□ 0.84
TSPAN9O75954 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TSPAN9O75954 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.31■□□□□ 0.84
TSPAN9O75954 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TSPAN9O75954 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TSPAN9O75954 PKD1P6-201ENST00000343738 4769 ntBASIC20.31■□□□□ 0.84
TSPAN9O75954 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.31■□□□□ 0.84
TSPAN9O75954 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TSPAN9O75954 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TSPAN9O75954 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TSPAN9O75954 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TSPAN9O75954 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TSPAN9O75954 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TSPAN9O75954 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TSPAN9O75954 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
TSPAN9O75954 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TSPAN9O75954 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN9O75954 RNF126P1-201ENST00000567452 1320 ntBASIC20.29■□□□□ 0.84
TSPAN9O75954 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN9O75954 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN9O75954 DRD5P2-201ENST00000421395 2012 ntBASIC20.29■□□□□ 0.84
TSPAN9O75954 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN9O75954 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN9O75954 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN9O75954 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN9O75954 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN9O75954 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TSPAN9O75954 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TSPAN9O75954 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TSPAN9O75954 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TSPAN9O75954 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TSPAN9O75954 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TSPAN9O75954 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TSPAN9O75954 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TSPAN9O75954 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TSPAN9O75954 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TSPAN9O75954 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TSPAN9O75954 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TSPAN9O75954 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TSPAN9O75954 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TSPAN9O75954 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TSPAN9O75954 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TSPAN9O75954 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TSPAN9O75954 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TSPAN9O75954 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.27■□□□□ 0.84
TSPAN9O75954 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TSPAN9O75954 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TSPAN9O75954 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TSPAN9O75954 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TSPAN9O75954 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.26■□□□□ 0.83
TSPAN9O75954 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.26■□□□□ 0.83
TSPAN9O75954 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.26■□□□□ 0.83
TSPAN9O75954 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TSPAN9O75954 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TSPAN9O75954 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TSPAN9O75954 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.25■□□□□ 0.83
TSPAN9O75954 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.25■□□□□ 0.83
TSPAN9O75954 AC110285.7-201ENST00000624417 1536 ntBASIC20.25■□□□□ 0.83
TSPAN9O75954 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.25■□□□□ 0.83
TSPAN9O75954 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TSPAN9O75954 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TSPAN9O75954 RNF165-205ENST00000588679 2904 ntBASIC20.25■□□□□ 0.83
TSPAN9O75954 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TSPAN9O75954 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.25■□□□□ 0.83
TSPAN9O75954 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TSPAN9O75954 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TSPAN9O75954 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
TSPAN9O75954 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TSPAN9O75954 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
TSPAN9O75954 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.24■□□□□ 0.83
TSPAN9O75954 ABHD17AP5-201ENST00000580133 923 ntBASIC20.24■□□□□ 0.83
TSPAN9O75954 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TSPAN9O75954 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TSPAN9O75954 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TSPAN9O75954 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TSPAN9O75954 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TSPAN9O75954 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.23■□□□□ 0.83
TSPAN9O75954 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms