Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UPK1BO75841 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPK1BO75841 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPK1BO75841 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPK1BO75841 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPK1BO75841 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPK1BO75841 AP003733.4-201ENST00000623785 1697 ntBASIC21.02■□□□□ 0.96
UPK1BO75841 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.02■□□□□ 0.96
UPK1BO75841 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPK1BO75841 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPK1BO75841 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
UPK1BO75841 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPK1BO75841 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPK1BO75841 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
UPK1BO75841 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UPK1BO75841 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK1BO75841 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK1BO75841 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK1BO75841 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK1BO75841 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK1BO75841 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK1BO75841 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPK1BO75841 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
UPK1BO75841 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21■□□□□ 0.95
UPK1BO75841 C9orf163-202ENST00000624034 2573 ntBASIC21■□□□□ 0.95
UPK1BO75841 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
UPK1BO75841 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21■□□□□ 0.95
UPK1BO75841 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
UPK1BO75841 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
UPK1BO75841 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21■□□□□ 0.95
UPK1BO75841 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
UPK1BO75841 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPK1BO75841 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.99■□□□□ 0.95
UPK1BO75841 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.99■□□□□ 0.95
UPK1BO75841 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPK1BO75841 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UPK1BO75841 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
UPK1BO75841 LINC00565-201ENST00000562710 2331 ntBASIC20.98■□□□□ 0.95
UPK1BO75841 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.98■□□□□ 0.95
UPK1BO75841 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK1BO75841 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.97■□□□□ 0.95
UPK1BO75841 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK1BO75841 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
UPK1BO75841 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UPK1BO75841 AL031258.1-201ENST00000623562 325 ntBASIC20.97■□□□□ 0.95
UPK1BO75841 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.97■□□□□ 0.95
UPK1BO75841 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK1BO75841 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UPK1BO75841 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPK1BO75841 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UPK1BO75841 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
UPK1BO75841 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPK1BO75841 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPK1BO75841 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPK1BO75841 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPK1BO75841 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UPK1BO75841 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPK1BO75841 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UPK1BO75841 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.95■□□□□ 0.94
UPK1BO75841 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPK1BO75841 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPK1BO75841 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
UPK1BO75841 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UPK1BO75841 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPK1BO75841 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UPK1BO75841 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPK1BO75841 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UPK1BO75841 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPK1BO75841 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPK1BO75841 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPK1BO75841 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPK1BO75841 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.94■□□□□ 0.94
UPK1BO75841 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPK1BO75841 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPK1BO75841 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UPK1BO75841 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UPK1BO75841 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UPK1BO75841 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UPK1BO75841 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UPK1BO75841 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.93■□□□□ 0.94
UPK1BO75841 AC141586.4-201ENST00000624558 1573 ntBASIC20.93■□□□□ 0.94
UPK1BO75841 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.93■□□□□ 0.94
UPK1BO75841 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UPK1BO75841 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPK1BO75841 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.92■□□□□ 0.94
UPK1BO75841 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPK1BO75841 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UPK1BO75841 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
UPK1BO75841 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
UPK1BO75841 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPK1BO75841 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
UPK1BO75841 AL133380.1-201ENST00000506013 324 ntBASIC20.91■□□□□ 0.94
UPK1BO75841 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
UPK1BO75841 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPK1BO75841 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPK1BO75841 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UPK1BO75841 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.9■□□□□ 0.94
UPK1BO75841 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UPK1BO75841 AC006077.2-201ENST00000623591 457 ntBASIC20.9■□□□□ 0.94
UPK1BO75841 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms