Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
TBC1D4O60343 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC25.62■■□□□ 1.69
TBC1D4O60343 AC019069.1-201ENST00000610008 1333 ntBASIC25.62■■□□□ 1.69
TBC1D4O60343 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TBC1D4O60343 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
TBC1D4O60343 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TBC1D4O60343 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TBC1D4O60343 PRTG-204ENST00000561292 833 ntTSL 3 BASIC25.6■■□□□ 1.69
TBC1D4O60343 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.6■■□□□ 1.69
TBC1D4O60343 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.6■■□□□ 1.69
TBC1D4O60343 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TBC1D4O60343 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.59■■□□□ 1.69
TBC1D4O60343 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TBC1D4O60343 AL592295.1-201ENST00000400984 884 ntBASIC25.59■■□□□ 1.69
TBC1D4O60343 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
TBC1D4O60343 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TBC1D4O60343 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.59■■□□□ 1.69
TBC1D4O60343 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.58■■□□□ 1.69
TBC1D4O60343 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TBC1D4O60343 AL031848.2-201ENST00000607670 837 ntBASIC25.58■■□□□ 1.69
TBC1D4O60343 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.58■■□□□ 1.69
TBC1D4O60343 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TBC1D4O60343 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.58■■□□□ 1.68
TBC1D4O60343 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
TBC1D4O60343 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TBC1D4O60343 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TBC1D4O60343 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TBC1D4O60343 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TBC1D4O60343 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TBC1D4O60343 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.56■■□□□ 1.68
TBC1D4O60343 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.56■■□□□ 1.68
TBC1D4O60343 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
TBC1D4O60343 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TBC1D4O60343 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TBC1D4O60343 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TBC1D4O60343 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TBC1D4O60343 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TBC1D4O60343 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
TBC1D4O60343 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.55■■□□□ 1.68
TBC1D4O60343 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TBC1D4O60343 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TBC1D4O60343 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TBC1D4O60343 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
TBC1D4O60343 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
TBC1D4O60343 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
TBC1D4O60343 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TBC1D4O60343 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
TBC1D4O60343 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
TBC1D4O60343 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TBC1D4O60343 HES6-204ENST00000409182 863 ntTSL 2 BASIC25.53■■□□□ 1.68
TBC1D4O60343 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
TBC1D4O60343 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TBC1D4O60343 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.52■■□□□ 1.68
TBC1D4O60343 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.52■■□□□ 1.68
TBC1D4O60343 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TBC1D4O60343 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
TBC1D4O60343 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TBC1D4O60343 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TBC1D4O60343 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
TBC1D4O60343 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.52■■□□□ 1.68
TBC1D4O60343 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TBC1D4O60343 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TBC1D4O60343 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TBC1D4O60343 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TBC1D4O60343 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
TBC1D4O60343 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TBC1D4O60343 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TBC1D4O60343 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.51■■□□□ 1.67
TBC1D4O60343 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.51■■□□□ 1.67
TBC1D4O60343 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
TBC1D4O60343 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.51■■□□□ 1.67
TBC1D4O60343 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
TBC1D4O60343 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
TBC1D4O60343 AC022616.5-201ENST00000518796 181 ntBASIC25.5■■□□□ 1.67
TBC1D4O60343 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.5■■□□□ 1.67
TBC1D4O60343 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
TBC1D4O60343 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TBC1D4O60343 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TBC1D4O60343 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
TBC1D4O60343 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
TBC1D4O60343 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TBC1D4O60343 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
TBC1D4O60343 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.48■■□□□ 1.67
TBC1D4O60343 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC25.48■■□□□ 1.67
TBC1D4O60343 GUSBP5-201ENST00000418136 578 ntBASIC25.48■■□□□ 1.67
TBC1D4O60343 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.48■■□□□ 1.67
TBC1D4O60343 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.48■■□□□ 1.67
TBC1D4O60343 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TBC1D4O60343 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.47■■□□□ 1.67
TBC1D4O60343 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
TBC1D4O60343 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
TBC1D4O60343 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.46■■□□□ 1.67
TBC1D4O60343 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
TBC1D4O60343 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.46■■□□□ 1.67
TBC1D4O60343 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.46■■□□□ 1.67
TBC1D4O60343 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.45■■□□□ 1.67
TBC1D4O60343 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
TBC1D4O60343 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.45■■□□□ 1.66
TBC1D4O60343 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
TBC1D4O60343 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms