Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NCK2O43639 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.5■■□□□ 1.83
NCK2O43639 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NCK2O43639 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
NCK2O43639 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
NCK2O43639 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
NCK2O43639 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
NCK2O43639 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
NCK2O43639 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NCK2O43639 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NCK2O43639 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NCK2O43639 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.48■■□□□ 1.83
NCK2O43639 AC103834.1-201ENST00000520383 144 ntBASIC26.48■■□□□ 1.83
NCK2O43639 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NCK2O43639 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
NCK2O43639 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NCK2O43639 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
NCK2O43639 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
NCK2O43639 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.47■■□□□ 1.83
NCK2O43639 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
NCK2O43639 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
NCK2O43639 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NCK2O43639 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.46■■□□□ 1.83
NCK2O43639 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC26.46■■□□□ 1.83
NCK2O43639 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.46■■□□□ 1.83
NCK2O43639 AC018755.3-202ENST00000596210 929 ntBASIC26.46■■□□□ 1.83
NCK2O43639 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.46■■□□□ 1.83
NCK2O43639 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
NCK2O43639 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
NCK2O43639 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.45■■□□□ 1.82
NCK2O43639 MIR3960-201ENST00000583311 91 ntBASIC26.45■■□□□ 1.82
NCK2O43639 MIR4508-201ENST00000584178 70 ntBASIC26.45■■□□□ 1.82
NCK2O43639 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.45■■□□□ 1.82
NCK2O43639 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
NCK2O43639 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
NCK2O43639 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
NCK2O43639 SPCS2P3-201ENST00000500401 656 ntBASIC26.44■■□□□ 1.82
NCK2O43639 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
NCK2O43639 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
NCK2O43639 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
NCK2O43639 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
NCK2O43639 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
NCK2O43639 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.42■■□□□ 1.82
NCK2O43639 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
NCK2O43639 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
NCK2O43639 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.42■■□□□ 1.82
NCK2O43639 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
NCK2O43639 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.42■■□□□ 1.82
NCK2O43639 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.42■■□□□ 1.82
NCK2O43639 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
NCK2O43639 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
NCK2O43639 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
NCK2O43639 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.41■■□□□ 1.82
NCK2O43639 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.41■■□□□ 1.82
NCK2O43639 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
NCK2O43639 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.41■■□□□ 1.82
NCK2O43639 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.41■■□□□ 1.82
NCK2O43639 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.41■■□□□ 1.82
NCK2O43639 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
NCK2O43639 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.4■■□□□ 1.82
NCK2O43639 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.4■■□□□ 1.82
NCK2O43639 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
NCK2O43639 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
NCK2O43639 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.4■■□□□ 1.82
NCK2O43639 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC26.4■■□□□ 1.82
NCK2O43639 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
NCK2O43639 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.39■■□□□ 1.82
NCK2O43639 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
NCK2O43639 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
NCK2O43639 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
NCK2O43639 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
NCK2O43639 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
NCK2O43639 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
NCK2O43639 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.39■■□□□ 1.82
NCK2O43639 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
NCK2O43639 AC145676.1-201ENST00000514988 2004 ntBASIC26.39■■□□□ 1.81
NCK2O43639 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
NCK2O43639 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC26.39■■□□□ 1.81
NCK2O43639 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.81
NCK2O43639 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.38■■□□□ 1.81
NCK2O43639 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NCK2O43639 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NCK2O43639 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NCK2O43639 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.38■■□□□ 1.81
NCK2O43639 AC020928.2-201ENST00000588717 2197 ntBASIC26.38■■□□□ 1.81
NCK2O43639 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NCK2O43639 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
NCK2O43639 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
NCK2O43639 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.37■■□□□ 1.81
NCK2O43639 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
NCK2O43639 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
NCK2O43639 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
NCK2O43639 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
NCK2O43639 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.36■■□□□ 1.81
NCK2O43639 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
NCK2O43639 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.36■■□□□ 1.81
NCK2O43639 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.36■■□□□ 1.81
NCK2O43639 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
NCK2O43639 PVT1_1.1-201ENST00000615125 194 ntBASIC26.36■■□□□ 1.81
NCK2O43639 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.36■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms