Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
TLR4O00206 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TLR4O00206 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TLR4O00206 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TLR4O00206 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.91■■□□□ 1.42
TLR4O00206 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.91■■□□□ 1.42
TLR4O00206 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.91■■□□□ 1.42
TLR4O00206 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
TLR4O00206 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.9■■□□□ 1.42
TLR4O00206 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
TLR4O00206 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.89■■□□□ 1.42
TLR4O00206 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TLR4O00206 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.89■■□□□ 1.42
TLR4O00206 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.89■■□□□ 1.42
TLR4O00206 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TLR4O00206 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TLR4O00206 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.89■■□□□ 1.41
TLR4O00206 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.89■■□□□ 1.41
TLR4O00206 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TLR4O00206 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TLR4O00206 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.88■■□□□ 1.41
TLR4O00206 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.88■■□□□ 1.41
TLR4O00206 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TLR4O00206 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TLR4O00206 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
TLR4O00206 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
TLR4O00206 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.87■■□□□ 1.41
TLR4O00206 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
TLR4O00206 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.87■■□□□ 1.41
TLR4O00206 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.87■■□□□ 1.41
TLR4O00206 AC131212.1-201ENST00000613771 668 ntBASIC23.87■■□□□ 1.41
TLR4O00206 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TLR4O00206 AL592295.1-201ENST00000400984 884 ntBASIC23.86■■□□□ 1.41
TLR4O00206 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TLR4O00206 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TLR4O00206 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TLR4O00206 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.85■■□□□ 1.41
TLR4O00206 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.85■■□□□ 1.41
TLR4O00206 AC239859.2-201ENST00000444165 318 ntBASIC23.85■■□□□ 1.41
TLR4O00206 THA1P-201ENST00000590384 1145 ntBASIC23.85■■□□□ 1.41
TLR4O00206 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TLR4O00206 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TLR4O00206 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TLR4O00206 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.84■■□□□ 1.41
TLR4O00206 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TLR4O00206 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TLR4O00206 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TLR4O00206 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TLR4O00206 BX255925.1-201ENST00000566954 1854 ntBASIC23.83■■□□□ 1.41
TLR4O00206 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.83■■□□□ 1.41
TLR4O00206 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TLR4O00206 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TLR4O00206 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TLR4O00206 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.83■■□□□ 1.4
TLR4O00206 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.82■■□□□ 1.4
TLR4O00206 AC022616.5-201ENST00000518796 181 ntBASIC23.82■■□□□ 1.4
TLR4O00206 Z92544.1-202ENST00000571933 1220 ntBASIC23.82■■□□□ 1.4
TLR4O00206 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
TLR4O00206 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.81■■□□□ 1.4
TLR4O00206 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
TLR4O00206 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TLR4O00206 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TLR4O00206 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.8■■□□□ 1.4
TLR4O00206 AC142472.1-201ENST00000612013 1741 ntBASIC23.8■■□□□ 1.4
TLR4O00206 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.8■■□□□ 1.4
TLR4O00206 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TLR4O00206 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TLR4O00206 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
TLR4O00206 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TLR4O00206 AL356441.2-201ENST00000443009 864 ntBASIC23.79■■□□□ 1.4
TLR4O00206 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
TLR4O00206 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TLR4O00206 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.78■■□□□ 1.4
TLR4O00206 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.78■■□□□ 1.4
TLR4O00206 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.78■■□□□ 1.4
TLR4O00206 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
TLR4O00206 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TLR4O00206 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
TLR4O00206 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
TLR4O00206 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.77■■□□□ 1.4
TLR4O00206 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.77■■□□□ 1.4
TLR4O00206 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
TLR4O00206 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.76■■□□□ 1.39
TLR4O00206 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TLR4O00206 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TLR4O00206 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.75■■□□□ 1.39
TLR4O00206 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.75■■□□□ 1.39
TLR4O00206 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TLR4O00206 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TLR4O00206 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TLR4O00206 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
TLR4O00206 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TLR4O00206 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TLR4O00206 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TLR4O00206 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TLR4O00206 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TLR4O00206 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.74■■□□□ 1.39
TLR4O00206 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TLR4O00206 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TLR4O00206 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms