Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
RNF223E7ERA6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF223E7ERA6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF223E7ERA6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF223E7ERA6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF223E7ERA6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF223E7ERA6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF223E7ERA6 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF223E7ERA6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RNF223E7ERA6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF223E7ERA6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RNF223E7ERA6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.1■□□□□ 0.81
RNF223E7ERA6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.1■□□□□ 0.81
RNF223E7ERA6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
RNF223E7ERA6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
RNF223E7ERA6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF223E7ERA6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.09■□□□□ 0.81
RNF223E7ERA6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.09■□□□□ 0.81
RNF223E7ERA6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF223E7ERA6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF223E7ERA6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
RNF223E7ERA6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
RNF223E7ERA6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.08■□□□□ 0.81
RNF223E7ERA6 AC137630.3-201ENST00000607245 391 ntBASIC20.08■□□□□ 0.81
RNF223E7ERA6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.08■□□□□ 0.81
RNF223E7ERA6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF223E7ERA6 MIR638-201ENST00000385237 100 ntBASIC20.07■□□□□ 0.8
RNF223E7ERA6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RNF223E7ERA6 AC120024.1-201ENST00000562672 995 ntBASIC20.07■□□□□ 0.8
RNF223E7ERA6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.07■□□□□ 0.8
RNF223E7ERA6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.07■□□□□ 0.8
RNF223E7ERA6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF223E7ERA6 AL449106.1-201ENST00000608517 1980 ntBASIC20.06■□□□□ 0.8
RNF223E7ERA6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF223E7ERA6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF223E7ERA6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF223E7ERA6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.06■□□□□ 0.8
RNF223E7ERA6 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF223E7ERA6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF223E7ERA6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
RNF223E7ERA6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF223E7ERA6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF223E7ERA6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF223E7ERA6 AC021242.3-201ENST00000607598 1377 ntBASIC20.05■□□□□ 0.8
RNF223E7ERA6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF223E7ERA6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF223E7ERA6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RNF223E7ERA6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF223E7ERA6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF223E7ERA6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.04■□□□□ 0.8
RNF223E7ERA6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF223E7ERA6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF223E7ERA6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.04■□□□□ 0.8
RNF223E7ERA6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF223E7ERA6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF223E7ERA6 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF223E7ERA6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF223E7ERA6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
RNF223E7ERA6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF223E7ERA6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF223E7ERA6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF223E7ERA6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF223E7ERA6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.03■□□□□ 0.8
RNF223E7ERA6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF223E7ERA6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RNF223E7ERA6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF223E7ERA6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF223E7ERA6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF223E7ERA6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF223E7ERA6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.02■□□□□ 0.8
RNF223E7ERA6 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.02■□□□□ 0.8
RNF223E7ERA6 AL139246.5-201ENST00000606645 996 ntBASIC20.02■□□□□ 0.8
RNF223E7ERA6 AC092028.1-203ENST00000608262 953 ntBASIC20.02■□□□□ 0.8
RNF223E7ERA6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF223E7ERA6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF223E7ERA6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
RNF223E7ERA6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.02■□□□□ 0.79
RNF223E7ERA6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF223E7ERA6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF223E7ERA6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.02■□□□□ 0.79
RNF223E7ERA6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.01■□□□□ 0.79
RNF223E7ERA6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF223E7ERA6 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF223E7ERA6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF223E7ERA6 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF223E7ERA6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
RNF223E7ERA6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF223E7ERA6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF223E7ERA6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF223E7ERA6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20■□□□□ 0.79
RNF223E7ERA6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF223E7ERA6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF223E7ERA6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20■□□□□ 0.79
RNF223E7ERA6 AC131281.2-201ENST00000520478 145 ntBASIC20■□□□□ 0.79
RNF223E7ERA6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF223E7ERA6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RNF223E7ERA6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20■□□□□ 0.79
RNF223E7ERA6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RNF223E7ERA6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF223E7ERA6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms