Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TRAV8-6A0A0B4J262 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV8-6A0A0B4J262 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.45■□□□□ 0.38
TRAV8-6A0A0B4J262 DUX4L11-201ENST00000611504 1267 ntBASIC17.45■□□□□ 0.38
TRAV8-6A0A0B4J262 DUX4L12-201ENST00000614593 1267 ntBASIC17.45■□□□□ 0.38
TRAV8-6A0A0B4J262 DUX4L14-201ENST00000621227 1267 ntBASIC17.45■□□□□ 0.38
TRAV8-6A0A0B4J262 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV8-6A0A0B4J262 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
TRAV8-6A0A0B4J262 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV8-6A0A0B4J262 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV8-6A0A0B4J262 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV8-6A0A0B4J262 AP002414.2-202ENST00000590929 1450 ntBASIC17.44■□□□□ 0.38
TRAV8-6A0A0B4J262 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRAV8-6A0A0B4J262 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRAV8-6A0A0B4J262 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV8-6A0A0B4J262 AC110285.7-201ENST00000624417 1536 ntBASIC17.44■□□□□ 0.38
TRAV8-6A0A0B4J262 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.44■□□□□ 0.38
TRAV8-6A0A0B4J262 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV8-6A0A0B4J262 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV8-6A0A0B4J262 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV8-6A0A0B4J262 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAV8-6A0A0B4J262 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC17.43■□□□□ 0.38
TRAV8-6A0A0B4J262 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV8-6A0A0B4J262 DUX4L13-201ENST00000554103 1267 ntBASIC17.43■□□□□ 0.38
TRAV8-6A0A0B4J262 DUX4L15-201ENST00000611059 1267 ntBASIC17.43■□□□□ 0.38
TRAV8-6A0A0B4J262 DUX4L23-201ENST00000615195 1269 ntBASIC17.43■□□□□ 0.38
TRAV8-6A0A0B4J262 DUX4L24-201ENST00000617576 1269 ntBASIC17.43■□□□□ 0.38
TRAV8-6A0A0B4J262 DUX4L22-201ENST00000618238 1269 ntBASIC17.43■□□□□ 0.38
TRAV8-6A0A0B4J262 DUX4L20-201ENST00000619712 1269 ntBASIC17.43■□□□□ 0.38
TRAV8-6A0A0B4J262 DUX4L21-201ENST00000622058 1269 ntBASIC17.43■□□□□ 0.38
TRAV8-6A0A0B4J262 DUX4L10-201ENST00000622460 1267 ntBASIC17.43■□□□□ 0.38
TRAV8-6A0A0B4J262 DUX4L25-201ENST00000624915 1269 ntBASIC17.43■□□□□ 0.38
TRAV8-6A0A0B4J262 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV8-6A0A0B4J262 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV8-6A0A0B4J262 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV8-6A0A0B4J262 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV8-6A0A0B4J262 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV8-6A0A0B4J262 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TRAV8-6A0A0B4J262 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-6A0A0B4J262 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV8-6A0A0B4J262 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TRAV8-6A0A0B4J262 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-6A0A0B4J262 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV8-6A0A0B4J262 AL024507.2-201ENST00000606070 2574 ntBASIC17.41■□□□□ 0.38
TRAV8-6A0A0B4J262 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV8-6A0A0B4J262 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV8-6A0A0B4J262 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV8-6A0A0B4J262 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV8-6A0A0B4J262 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV8-6A0A0B4J262 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRAV8-6A0A0B4J262 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV8-6A0A0B4J262 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV8-6A0A0B4J262 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV8-6A0A0B4J262 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRAV8-6A0A0B4J262 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV8-6A0A0B4J262 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV8-6A0A0B4J262 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV8-6A0A0B4J262 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV8-6A0A0B4J262 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV8-6A0A0B4J262 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV8-6A0A0B4J262 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
TRAV8-6A0A0B4J262 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-6A0A0B4J262 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-6A0A0B4J262 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-6A0A0B4J262 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV8-6A0A0B4J262 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-6A0A0B4J262 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRAV8-6A0A0B4J262 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV8-6A0A0B4J262 MIR7108-201ENST00000614319 87 ntBASIC17.39■□□□□ 0.37
TRAV8-6A0A0B4J262 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-6A0A0B4J262 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-6A0A0B4J262 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-6A0A0B4J262 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TRAV8-6A0A0B4J262 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TRAV8-6A0A0B4J262 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TRAV8-6A0A0B4J262 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-6A0A0B4J262 DUSP8P4-201ENST00000399538 1761 ntBASIC17.38■□□□□ 0.37
TRAV8-6A0A0B4J262 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-6A0A0B4J262 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-6A0A0B4J262 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-6A0A0B4J262 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-6A0A0B4J262 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-6A0A0B4J262 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-6A0A0B4J262 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-6A0A0B4J262 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-6A0A0B4J262 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAV8-6A0A0B4J262 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-6A0A0B4J262 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-6A0A0B4J262 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-6A0A0B4J262 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-6A0A0B4J262 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-6A0A0B4J262 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV8-6A0A0B4J262 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.37■□□□□ 0.37
TRAV8-6A0A0B4J262 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-6A0A0B4J262 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-6A0A0B4J262 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-6A0A0B4J262 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-6A0A0B4J262 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-6A0A0B4J262 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TRAV8-6A0A0B4J262 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms