Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.77■□□□□ 0.6
TRAV30A0A087WSZ9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV30A0A087WSZ9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV30A0A087WSZ9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
TRAV30A0A087WSZ9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
TRAV30A0A087WSZ9 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TRAV30A0A087WSZ9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV30A0A087WSZ9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV30A0A087WSZ9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.76■□□□□ 0.59
TRAV30A0A087WSZ9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV30A0A087WSZ9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.76■□□□□ 0.59
TRAV30A0A087WSZ9 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV30A0A087WSZ9 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV30A0A087WSZ9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
TRAV30A0A087WSZ9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV30A0A087WSZ9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV30A0A087WSZ9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV30A0A087WSZ9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV30A0A087WSZ9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV30A0A087WSZ9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV30A0A087WSZ9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV30A0A087WSZ9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.75■□□□□ 0.59
TRAV30A0A087WSZ9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TRAV30A0A087WSZ9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.75■□□□□ 0.59
TRAV30A0A087WSZ9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV30A0A087WSZ9 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TRAV30A0A087WSZ9 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV30A0A087WSZ9 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
TRAV30A0A087WSZ9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TRAV30A0A087WSZ9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV30A0A087WSZ9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV30A0A087WSZ9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV30A0A087WSZ9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRAV30A0A087WSZ9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV30A0A087WSZ9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV30A0A087WSZ9 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV30A0A087WSZ9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV30A0A087WSZ9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV30A0A087WSZ9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV30A0A087WSZ9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV30A0A087WSZ9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV30A0A087WSZ9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV30A0A087WSZ9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV30A0A087WSZ9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAV30A0A087WSZ9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV30A0A087WSZ9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TRAV30A0A087WSZ9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.72■□□□□ 0.59
TRAV30A0A087WSZ9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TRAV30A0A087WSZ9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV30A0A087WSZ9 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV30A0A087WSZ9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.71■□□□□ 0.59
TRAV30A0A087WSZ9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV30A0A087WSZ9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV30A0A087WSZ9 AC096887.2-201ENST00000623443 1957 ntBASIC18.71■□□□□ 0.59
TRAV30A0A087WSZ9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.71■□□□□ 0.59
TRAV30A0A087WSZ9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV30A0A087WSZ9 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAV30A0A087WSZ9 AC142381.3-201ENST00000568208 1670 ntBASIC18.7■□□□□ 0.58
TRAV30A0A087WSZ9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAV30A0A087WSZ9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.7■□□□□ 0.58
TRAV30A0A087WSZ9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV30A0A087WSZ9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV30A0A087WSZ9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV30A0A087WSZ9 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
TRAV30A0A087WSZ9 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV30A0A087WSZ9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.69■□□□□ 0.58
TRAV30A0A087WSZ9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV30A0A087WSZ9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV30A0A087WSZ9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
TRAV30A0A087WSZ9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV30A0A087WSZ9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV30A0A087WSZ9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV30A0A087WSZ9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRAV30A0A087WSZ9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRAV30A0A087WSZ9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV30A0A087WSZ9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV30A0A087WSZ9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV30A0A087WSZ9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV30A0A087WSZ9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV30A0A087WSZ9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV30A0A087WSZ9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV30A0A087WSZ9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.68■□□□□ 0.58
TRAV30A0A087WSZ9 MIR7108-201ENST00000614319 87 ntBASIC18.68■□□□□ 0.58
TRAV30A0A087WSZ9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV30A0A087WSZ9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV30A0A087WSZ9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV30A0A087WSZ9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV30A0A087WSZ9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV30A0A087WSZ9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV30A0A087WSZ9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV30A0A087WSZ9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.67■□□□□ 0.58
TRAV30A0A087WSZ9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.67■□□□□ 0.58
TRAV30A0A087WSZ9 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV30A0A087WSZ9 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.67■□□□□ 0.58
TRAV30A0A087WSZ9 MIR3960-201ENST00000583311 91 ntBASIC18.67■□□□□ 0.58
TRAV30A0A087WSZ9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
TRAV30A0A087WSZ9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TRAV30A0A087WSZ9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV30A0A087WSZ9 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAV30A0A087WSZ9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms