Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 TMEM14DP-201ENST00000422205 345 ntBASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 KRT223P-202ENST00000449164 1292 ntBASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 AC091167.2-201ENST00000579581 588 ntBASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 AC099568.2-201ENST00000609194 695 ntBASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCH2Q9Y6C5 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 SNX29P1-201ENST00000548357 1007 ntBASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 FLJ13224-201ENST00000313737 1514 ntBASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PTCH2Q9Y6C5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 ABALON-201ENST00000629058 1903 ntBASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 AC234783.1-201ENST00000441761 496 ntBASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 AP005482.1-201ENST00000563722 1273 ntBASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 AC133552.6-201ENST00000613406 534 ntBASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 MIR6775-201ENST00000617557 69 ntBASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PTCH2Q9Y6C5 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PTCH2Q9Y6C5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.93■□□□□ 0.62
PTCH2Q9Y6C5 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTCH2Q9Y6C5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms