Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 KRT18P1-202ENST00000452408 1331 ntBASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
R3HCC1Q9Y3T6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 VENTXP7-201ENST00000475503 772 ntBASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 AC124864.1-201ENST00000623408 392 ntBASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.5■□□□□ 0.71
R3HCC1Q9Y3T6 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 AC016734.2-201ENST00000624325 1377 ntBASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 AC022898.2-201ENST00000616822 1312 ntBASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
R3HCC1Q9Y3T6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.48■□□□□ 0.71
R3HCC1Q9Y3T6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms