Protein–RNA interactions for Protein: Q9NZR2

LRP1B, Low-density lipoprotein receptor-related protein 1B, humanhuman

Predictions only

Length 4,599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1BQ9NZR2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 RN7SL618P-201ENST00000477850 296 ntBASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 USP32P1-208ENST00000506594 1164 ntBASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 AC092552.1-201ENST00000547243 906 ntBASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 AC138028.4-201ENST00000564984 1845 ntBASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 AC087499.6-201ENST00000411576 835 ntBASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LRP1BQ9NZR2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 MIR1908-201ENST00000410394 80 ntBASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 USB1-202ENST00000423271 1217 ntTSL 2 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 KRT223P-202ENST00000449164 1292 ntBASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 AC093004.1-201ENST00000508850 424 ntBASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 FAM8A2P-201ENST00000528813 1142 ntBASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 MIR6869-201ENST00000619434 62 ntBASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 AC093525.8-201ENST00000624099 1342 ntBASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LRP1BQ9NZR2 AC234783.1-201ENST00000441761 496 ntBASIC10.6□□□□□ -0.71
LRP1BQ9NZR2 CROCCP4-201ENST00000457096 498 ntBASIC10.6□□□□□ -0.71
LRP1BQ9NZR2 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC10.6□□□□□ -0.71
LRP1BQ9NZR2 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC10.6□□□□□ -0.71
LRP1BQ9NZR2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LRP1BQ9NZR2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC10.6□□□□□ -0.71
LRP1BQ9NZR2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LRP1BQ9NZR2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LRP1BQ9NZR2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms