Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 AC026691.1-201ENST00000602502 2017 ntBASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 KRT17P6-201ENST00000453795 1220 ntBASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 TPSP2-201ENST00000561760 610 ntBASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 AC114341.1-201ENST00000618070 349 ntBASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
POLR2J3Q9H1A7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 SIGLEC16-201ENST00000599858 1437 ntBASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 BNIP3P18-201ENST00000593976 575 ntBASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 AP000867.4-201ENST00000641616 219 ntBASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 AL662844.4-201ENST00000606367 2838 ntBASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 NSUN5P1-202ENST00000421140 1535 ntBASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 NSUN5P2-203ENST00000457352 1529 ntBASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
POLR2J3Q9H1A7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
POLR2J3Q9H1A7 CYP2T1P-202ENST00000641596 2535 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms